CX301746

Overview
NameCX301746
Unique NameCX301746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30
Identity = 69/223 (30.94%), Postives = 120/223 (53.81%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQSRT 677
            S   KDLI K+L+R+  KR TAA+A  HPW+    + +  D  ++  V+ ++  F     LKK  L  +A+ + E++I  LK+ F  +DT+ +GT++ +E  N       KL      ++ E+  L +A D + +G IDY EF+      H  + E+ L   F+ FD D++G I + EL+  ++   +     +D+++   DTD DG ++YEE +  +++  T
Sbjct:  313 SESAKDLIRKMLIRDPKKRITAAEALEHPWM---TDTKISDKPINSAVLVRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKL------TESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGMGDDATIDEVINDVDTDNDGRINYEEFVAMMRKGTT 526          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29
Identity = 71/213 (33.33%), Postives = 113/213 (53.05%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+ K+L ++  KR T+AQ   HPW++   + E+ D  +D  V+ ++  F     LKK  L  +A  + E++I  LK++F  +DT+ +GT++ EE +    +   KL      S+ EV  L +A D + NG IDY EFI      H  + +++L   F+ FD D +G I + EL   L    +     +  I+ + DTD DG ++YEE
Sbjct:  313 SESAKDLVRKMLTQDPKKRITSAQVLQHPWLR---DGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKL------SEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKDIISEVDTDNDGRINYEE 516          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29
Identity = 70/223 (31.39%), Postives = 118/223 (52.91%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQSRT 677
            S   KDL+ KLL ++  +R +AAQA  HPW++     E+ D  +D  V+ ++  F     LKK  L  +A+ + E++I  LK +F  +DT+ +GT++ EE +N   +   KL      ++ EV  L +A D + NG IDY EFI+     + F  ++++   F+ FD D +G I   EL   +    +     + +++ + DTD DG ++YEE    ++   T
Sbjct:  330 SESAKDLVRKLLTKDPKQRISAAQALEHPWIRGG---EAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKL------TEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSGIT 543          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.763e-29
Identity = 71/213 (33.33%), Postives = 113/213 (53.05%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+ K+L R+  KR T+AQ   H W+++  E    D  +D  V+ ++  F     LKK  L  +A  + E++I  LK++F+ +DT+ +GT++ EE +    +   KL      S+ EV  L +A D + NG IDY EFI      H  + +++L   F+ FD D +G I + EL   L    +     + +I+ + DTD DG ++YEE
Sbjct:  293 SESAKDLVRKMLTRDPKKRLTSAQVLQHQWLREGGEAS--DKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKL------SEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIREIISEVDTDNDGRINYEE 497          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29
Identity = 67/223 (30.04%), Postives = 115/223 (51.57%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQSRT 677
            S   KDL+ K+L ++  +R TAAQ   HPW++     E+ D  +D  V+ ++  F     LKK  L  +A+ + E++I  LK +F  IDT+ +GT++ EE +           L  + S+ EV  L +A D + NG IDY EFI+     +    ++++   F+ FD D +G I + EL   +    +     + +++ + DTD DG +++EE    ++   T
Sbjct:  308 SESAKDLVRKMLTKDPKRRITAAQVLEHPWIKGG---EAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTR------LGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRINFEEFCAMMRSGST 521          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.430e-28
Identity = 72/220 (32.73%), Postives = 121/220 (55.00%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            S + KDL+ K+L  +  +R TAAQ  NHPW+++  + E+ D+ +D  V+ +L  F      KK  L  +A  + E++I  LK++F  +DT+ +GT+++EE      +   +L      S+ EV  L +A DA+ NG IDY EFIA     +    E++L   F+ FD D +G I  +EL + L    +     + +I+ + D D DG ++YEE +  +++
Sbjct:  296 SPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKE--DGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRL------SEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRK 507          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28
Identity = 71/220 (32.27%), Postives = 121/220 (55.00%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQ 668
            S + KDL+ K+L  +  +R TAAQ  NHPW+++  + E+ D+ +D  V+ +L  F      KK  L  +A  + E++I  LK++F  +DT+ +GT+++EE      +   +L      S+ EV  L +A DA+ NG IDY EFIA     +    E++L   F+ FD D +G I  +EL + L    +     + +I+ + D D DG ++Y+E +  +++
Sbjct:  301 SPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKE--DGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRL------SEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMRK 512          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28
Identity = 66/212 (31.13%), Postives = 114/212 (53.77%), Query Frame = 3
Query:   12 IEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            ++ K L++++L RN  +R +AA+   HPW++   + E+ D  +D  V+ +L  F +   LKK  L  +A  + E++I  LK LF  IDT+ +GT+++EE +           L    SK EV  L +A D + NG ID  EFI+     +    + ++   F+ FD D +G I ++EL   +    +     + +I+ + DTD DG++++EE
Sbjct:  261 VKAKHLVNRMLNRNPKERISAAEVLGHPWMK---DGEASDKPIDGVVLSRLKQFRDMNKLKKVALKVIAANLSEEEIKGLKTLFTNIDTDKSGTITLEELKTGLTR------LGSNLSKTEVEQLMEAADVDGNGTIDIDEFISATMHRYRLDRDDHVYQAFQHFDKDNDGHITKEELEMAMKEHGVGDEVSIKQIITEVDTDNDGKINFEE 463          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28
Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEE 647
            S   KDL+ ++L+R+  KR T  +   HPW +  V+  + D  +D  V+ +L  F     LKK  +  +A+ + E++I  LK++F MIDT+ +G +++EE +   D       +       E++ L +A D +N+G IDY EFIA     +  + E +L   F  FD D +G I + EL++      L  +  +D IL++ D D DG +DY E
Sbjct:  362 SESAKDLVRRMLIRDPKKRMTTHEVLCHPWAR--VDGVALDKPLDSAVLSRLQQFSAMNKLKKIAIKVIAESLSEEEIAGLKEMFKMIDTDNSGHITLEELKKGLD------RVGADLKDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNKIEKEDHLFTAFSYFDQDGSGYITRDELQQACKQFGLADV-HLDDILREVDKDNDGRIDYSE 565          
BLAST of CX301746 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28
Identity = 70/222 (31.53%), Postives = 116/222 (52.25%), Query Frame = 3
Query:    9 SIEVKDLISKLLVRNMSKRYTAAQAYNHPWVQQQVEVESRDLEVDPEVIKKLGDFLESQALKKAILLYVAQQIPEKDIDHLKKLFVMIDTNGNGTLSMEEFENAFDEFQQKLNLNKQFSKEEVVNLFKAIDANNNGVIDYSEFIAVFAEHHLFKTEKYLRMVFERFDLDKNGKINQQELRKLLSGGSLVPIDQVDKILKQADTDGDGELDYEEVLVYIKQSR 674
            S   KDL+ K+L ++  +R T+AQ  +HPW+++  E    D  +D  V+ ++  F     LK+  L  +A+ + E++I  LK +F  +DT+ +GT++ EE ++       KL      S+ EV  L  A D + NG IDY EFI   A  H  K E Y    F+ FD D +G I + EL   +    +     +  I+ + D+D DG ++Y+E    ++++R
Sbjct:  309 SNSAKDLVRKMLTQDPRRRITSAQVLDHPWMREGGEAS--DKPIDSAVLSRMKQFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKL------SEVEVQQLMDAADVDGNGTIDYLEFIT--ATMHRHKLESYEHQAFQYFDKDNSGFITKDELESAMKEYGMGDEATIKDIISEVDSDNDGRINYDEFCAMMRRAR 520          
The following BLAST results are available for this feature:
BLAST of CX301746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
CDPKT_ARATH9.903e-3030.94Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPK2_ORYSJ1.689e-2933.33Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPKF_ARATH2.206e-2931.39Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPK2_MAIZE3.763e-2933.33Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKL_ARATH6.419e-2930.04Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPKY_ARATH1.430e-2832.73Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH1.868e-2832.27Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPKV_ARATH4.161e-2831.13Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPKK_ARATH4.161e-2832.39Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK_DAUCA7.097e-2831.53Calcium-dependent protein kinase OS=Daucus carota ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC08013B06SK PhyRootSw1 Citrus sinensis cDNA clone C08013B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301746 ID=CX301746; Name=CX301746; organism=Citrus sinensis; type=EST; length=679bp
AAAGATGCAGTATTGAGGTGAAGGATTTGATTTCCAAGCTTTTGGTTAGA
AATATGTCCAAGAGATACACCGCCGCACAAGCATATAACCATCCTTGGGT
CCAACAACAAGTCGAAGTTGAAAGCAGAGATCTTGAAGTTGATCCTGAAG
TTATTAAAAAACTCGGTGATTTCTTGGAAAGTCAAGCATTGAAGAAAGCA
ATTTTATTATATGTTGCTCAACAAATTCCTGAAAAAGACATCGACCATTT
GAAAAAGCTGTTTGTGATGATTGATACAAATGGTAACGGAACATTGTCAA
TGGAAGAATTTGAGAATGCATTTGATGAATTCCAGCAAAAACTCAACTTA
AACAAGCAATTTTCAAAAGAAGAAGTTGTCAACCTCTTCAAGGCCATCGA
TGCCAATAACAACGGCGTTATTGATTATTCTGAATTTATCGCTGTCTTTG
CTGAACATCATCTCTTTAAAACTGAAAAATATCTTCGTATGGTCTTTGAA
CGTTTCGATTTGGATAAAAATGGAAAGATTAATCAACAAGAACTTAGAAA
ATTACTGAGCGGAGGAAGTTTGGTGCCAATCGATCAAGTTGATAAAATCC
TTAAACAAGCTGATACTGATGGTGATGGAGAGTTGGATTACGAAGAAGTC
TTGGTTTATATCAAGCAATCCAGAACTTG
back to top