CX301740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 1.809e-49 Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 RTNVFDPFSLDVWDPF+GFL+ LTNAP A++ + F NA++DW+ETP+AHVFKAD+PGL+ G ILQISGERS E EEK+D WHRVERSSGKF+RRFRLP+NAKVE+VKAS ENGV +VTVP Sbjct: 12 RTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVP 140
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 9.925e-48 Identity = 92/133 (69.17%), Postives = 108/133 (81.20%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFL--SSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFS D+WDPF+GF SSAL NA S+AR+ + F NAR+DWKETP+AHVFKADLPGL+ +LQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP+NAK+E+VKA+ ENGV TV VP Sbjct: 12 RSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVP 143
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 9.925e-48 Identity = 93/132 (70.45%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLS-SALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 RTNVFDPFSLDV+DPF+GFL+ S L NAP A + + F NA++DW+ETP+AHVFKADLPGLR G ILQISGERS E EEKNDKWHRVERSSGKF RRFRLP+NAK+E++KAS ENGV +VTVP Sbjct: 12 RTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVP 141
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.888e-47 Identity = 97/140 (69.29%), Postives = 108/140 (77.14%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFL-----SSALTNAPSSAR----ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLD+WDPFDGF SS+ + PS R ET+ FA ARIDWKETP+AHVFKAD+PGL+ G ILQISGER+KEQEEK D+WHRVERSSGKFLRRFRLPDNAK EQ+KAS ENGV TVTVP Sbjct: 6 RSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVP 145
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.097e-46 Identity = 92/140 (65.71%), Postives = 105/140 (75.00%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNAPSS---------ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLD+WDPFDGF + + + S + ET+ FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGERSKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KAS ENGV TVTVP Sbjct: 6 RSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVP 145
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.445e-46 Identity = 89/131 (67.94%), Postives = 103/131 (78.63%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLDVWDPF F ++A +ET+ F N IDWKETPQAHVFKADLPGL+ G++LQISGER+KE+EEKNDKWHRVERSSGKFLRRFRLP+NAKV++VKA+ NGV TVTVP Sbjct: 12 RSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVP 141
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 5.446e-46 Identity = 89/133 (66.92%), Postives = 103/133 (77.44%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNA--PSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLD+WDPFDGF + + + P + + + FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGER KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KAS ENGV TVTVP Sbjct: 6 RSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVP 138
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 2.070e-45 Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA ENGV TVTVP Sbjct: 6 RSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVP 134
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.703e-45 Identity = 86/131 (65.65%), Postives = 104/131 (79.39%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R+NVFDPFSLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA ENGV TVTVP Sbjct: 6 RSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVP 134
BLAST of CX301740 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.610e-45 Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 3 Query: 3 RTNVFDPFSLDVWDPFDGF-----LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASKENGVQTVTVP 395 R NVFDPFSLDVWDPF F LSSA + P +RE S F + R+DWKETP+AHVFKAD+PGL+ ++LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAKVEQVKAS ENGV TVTVP Sbjct: 12 RNNVFDPFSLDVWDPFKDFPFPNTLSSA--SFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVP 145 The following BLAST results are available for this feature:
BLAST of CX301740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301740 ID=CX301740; Name=CX301740; organism=Citrus sinensis; type=EST; length=397bpback to top |