CX301737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.180e-58 Identity = 105/137 (76.64%), Postives = 121/137 (88.32%), Query Frame = 3 Query: 24 RAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTIV 434 R AASG K+R+T GLPV A+MNCADN+GAKNLYI++V G G+RLNRLP A GDMVLATVKKGKP+LRKK+ A+V+RQRK WRRKDGV++YFEDNAGVIVNPKGEMKGS + GPVAKECADLWPRI+SNAGT+V Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 221.09 bits (562), Expect = 2.061e-57 Identity = 106/140 (75.71%), Postives = 119/140 (85.00%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTIV 434 +SKR SGNKFR++ GLPVAA +NCADNTGAKNLYII+VKG RLNRLP A GDMV+ATVKKGKP+LRKKV AV++RQRKPWRRKDGVF+YFEDNAGVIVNPKGEMKGS + GP+ KECADLWPRI+S A IV Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.591e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 5.996e-57 Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 15 VSKRAGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTI 431 +SKR +SG KFR++ GLPV AV+NCADNTGAKNLYII+VKG RLNRLP AG GDMV+ATVKKGKPELRKKV AVVIRQRK +RRKDGVF+YFEDNAGVIVN KGEMKGS + GPVAKECADLWPRI+SNAG+I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301737 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 218.779 bits (556), Expect = 1.023e-56 Identity = 101/136 (74.26%), Postives = 118/136 (86.76%), Query Frame = 3 Query: 27 AGSAASGNKFRLTCGLPVAAVMNCADNTGAKNLYIIAVKGWGSRLNRLPKAGPGDMVLATVKKGKPELRKKVTFAVVIRQRKPWRRKDGVFIYFEDNAGVIVNPKGEMKGSQVAGPVAKECADLWPRISSNAGTIV 434 +G+ A G KFR++ GLPV A+MNCADN+GA+NLYIIAVKG GSRLNRLP A GDMV+ATVKKGKPELRKKV A+V+RQ K WRR+DGVF+YFEDNAGVI NPKGEMKGS + GPV KECADLWPR++SN+G +V Sbjct: 2 SGNGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137 The following BLAST results are available for this feature:
BLAST of CX301737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301737 ID=CX301737; Name=CX301737; organism=Citrus sinensis; type=EST; length=486bpback to top |