CX301630

Overview
NameCX301630
Unique NameCX301630
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301630 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3
Query:    6 QMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTMLGFEGGVG 206
            +M  +  + + LY  T DC+ KI   EG +A FKGA +NA+R  G ALVLV+Y EI+ ++GFEGGVG
Sbjct:  241 RMMMQAGRADILYSSTWDCWVKIATREGPTAFFKGALSNAIRGSGGALVLVIYDEIQKLMGFEGGVG 307          
BLAST of CX301630 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.229e-12
Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 3
Query:    3 LQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTMLG 188
            + MQS + K E +YK T DC+ KI K EG+ A FKGA +N LR  G ALVLV Y E+K +LG
Sbjct:  240 MMMQSGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLRGTGGALVLVFYDEVKALLG 301          
BLAST of CX301630 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.389e-11
Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 3
Query:    3 LQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTML 185
            + MQS + K E +YKGT  C+  I K EGT A FKGA +N LR  G A VLVLY EIK +L
Sbjct:  240 MMMQSGRAKSEIVYKGTLHCWATIAKQEGTGAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 300          
BLAST of CX301630 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 4.426e-11
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 3
Query:    3 LQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTML 185
            + MQS +   + +YKGT DC+ KI+K+EG  A FKGA +N LR +G A VLVLY E+K ++
Sbjct:  238 MMMQSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298          
BLAST of CX301630 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.861e-11
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 3
Query:    3 LQMQSEKPKEEWLYKGTADCFNKIVKNEGTSALFKGAGANALRTVGSALVLVLYGEIKTML 185
            + MQS +   + +YKGT DC+ KI K+EG  A FKGA +N LR +G A VLVLY E+K ++
Sbjct:  238 MMMQSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI 298          
The following BLAST results are available for this feature:
BLAST of CX301630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ADT_DICDI4.003e-1250.75Mitochondrial substrate carrier family protein anc... [more]
ADT1_ANOGA5.229e-1254.84ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT2_ANOGA3.389e-1155.74ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT3_BOVIN4.426e-1150.82ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT3_PIG9.861e-1150.82ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
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Properties
Property NameValue
Genbank descriptionC08011H02SK PhyRootSw1 Citrus sinensis cDNA clone C08011H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301630 ID=CX301630; Name=CX301630; organism=Citrus sinensis; type=EST; length=356bp
GTTTACAAATGCAATCTGAGAAGCCAAAGGAGGAGTGGTTATACAAGGGA
ACTGCTGACTGCTTCAACAAGATCGTCAAGAACGAGGGTACCTCTGCCTT
GTTCAAGGGTGCTGGAGCCAACGCTCTCAGAACCGTTGGATCTGCCTTAG
TGTTAGTGTTATACGGTGAAATCAAGACCATGCTTGGATTCGAGGGTGGT
GTTGGAGGTTCTGAATAAACTTGTTTGTTTTTGATTAGAATTGTTGTATG
GTAAATTTTTCATCTACATACGAAATGCTCTTGAGTTTTCTTAAATGTTG
TAGGAAATTTTGGTGGTAAACTAAACAACAAAAACCCACAAAAAAAAAAA
AAAAAA
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