CX301628

Overview
NameCX301628
Unique NameCX301628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3710 contig Csv1_Contig3710:64..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 397.512 bits (1020), Expect = 3.962e-110
Identity = 196/231 (84.85%), Postives = 217/231 (93.94%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            LLTVG+LLVT+TPNSL+ERGR +EGKAVLR+IRGTD +EPEF +L+EASR+AKEVKHPFRNLL+RRNRPQLVIAVALQIFQQCTGINAIMFYAPVLF TLGFG  ASLYS V+TGAVNVLSTLVSIYSVDKVGRR+LLLEAG+QMF SQ VIAIILG+KV D S +L  GFA+LVV+MICT+++AFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTF+IAQAFLS
Sbjct:  215 LLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVEPEFADLLEASRLAKEVKHPFRNLLQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLS 445          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.273e-80
Identity = 142/236 (60.17%), Postives = 187/236 (79.24%), Query Frame = 1
Query:   22 AEFGTRLLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFL 729
            A F   L+T+G   + +TPNSL+ERG  E G+ VL K+RGT+ +  E  ++V+AS +A  +KHPFRN+L++R+RPQLV+A+ + +FQ  TGIN+I+FYAPVLF+T+GFGG+ASLYS+ +TGAV VLST +SI  VD++GRR LL+  GIQM + Q ++A+ILG+K  D+ E L  G++V+VVI IC F+ AF WSWGPLGW IPSE FPLETRSAGQS+TV VNLLFTF+IAQAFL
Sbjct:  210 AAFPALLMTLGGYFLPETPNSLVERGLTERGRRVLVKLRGTENVNAELQDMVDASELANSIKHPFRNILQKRHRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGNASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQE-LSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFL 444          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.822e-78
Identity = 139/231 (60.17%), Postives = 183/231 (79.22%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            L+T+G LL+ +TPNSLIE+G  E+G+ VL KIRGT  ++ EF ++++AS +A  +KHPFRN+L++RNRPQLV+A+ +  FQ  TGIN I+FYAP LF+++GFGG+A+LYS+ +TGAV   ST +SI +VD++GRR LL+  GIQM   Q ++AIILG+K  D ++ L   F+VLVVIMIC F+ AF WSWGPLGW +PSE FPLETRSAGQS+TV VNL FTFVIAQ+F S
Sbjct:  216 LMTIGGLLLPETPNSLIEQGLHEKGRNVLEKIRGTKHVDAEFQDMLDASELANSIKHPFRNILEKRNRPQLVMAIFMPTFQILTGINIILFYAPPLFQSMGFGGNAALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQMITCQVIVAIILGVKFGD-NQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSFPS 445          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.405e-75
Identity = 136/232 (58.62%), Postives = 176/232 (75.86%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFL 729
            ++TVGSL++ DTPNS+IERG+ EE +A L+++RG + ++ EF +LV AS  +K+V+HP+RNLL+R+ RP L +A+A+  FQQ TGIN IMFYAPVLF T+GFG  A+L S VITG VNV +T+VSIY VDK GRR L LE G+QM + Q ++A  +G K  V     DL   +AV+VV+ IC ++S FAWSWGPLGWL+PSE FPLE RSA QSV V VN+ FTFV+AQ FL
Sbjct:  216 IITVGSLVLPDTPNSMIERGQHEEARAHLKRVRGVEDVDEEFTDLVHASEDSKKVEHPWRNLLQRKYRPHLSMAIAIPFFQQLTGINVIMFYAPVLFDTIGFGSDAALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFL 447          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 8.629e-73
Identity = 133/233 (57.08%), Postives = 174/233 (74.68%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            ++T+GSL++ DTPNS+IERG+ EE K  LR+IRG D +  EF +LV AS+ ++ ++HP+RNLL+R+ RP L +AV +  FQQ TGIN IMFYAPVLF T+GF   ASL S V+TG+VNV +TLVSIY VD+ GRR L LE G QM + Q V+A  +G K  V     +L   +A++VV  IC +++ FAWSWGPLGWL+PSE FPLE RSA QS+TV VN++FTF+IAQ FL+
Sbjct:  214 IITIGSLVLPDTPNSMIERGQHEEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNLLRRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLT 446          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.472e-72
Identity = 135/232 (58.19%), Postives = 174/232 (75.00%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIK--VKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFL 729
            ++TVGSL++ DTPNS+IERG+F   +A LRKIRG D I+ E  +L+ AS  +K V+HP+RNLL+R+ RP L +A+ +  FQQ TGIN IMFYAPVLF+T+GFG  A+L S V+TG VNV +T+VSIY VDK GRR L LE G QM +SQ  +A  +G K  V      L   +A++VV+ IC +++AFAWSWGPLGWL+PSE FPLE RSA QS+TV VN++FTF+IAQ FL
Sbjct:  212 IITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNLLQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFL 443          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP14_ARATH (Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.627e-71
Identity = 133/231 (57.58%), Postives = 178/231 (77.06%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVI-AVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFL 729
            L+ +G L++ +TPNSL+E+G+ E+ KAVL K+RGT+ IE EF +LVEAS  A+ VK+PFRNLL RRNRPQLVI A+ L  FQQ TG+N+I+FYAPV+F++LGFGGSASL S+ IT A  V++ ++S+YS DK GRR LLLEA ++MF    V+ + L +K  +  ++L     +++V++IC F+ A+  SWGP+GWL+PSE FPLETRSAGQSV VCVNL FT +IAQ FL
Sbjct:  216 LMFLGGLVLPETPNSLVEQGKLEKAKAVLIKVRGTNNIEAEFQDLVEASDAARAVKNPFRNLLARRNRPQLVIGAIGLPAFQQLTGMNSILFYAPVMFQSLGFGGSASLISSTITNAALVVAAIMSMYSADKFGRRFLLLEASVEMFCYMVVVGVTLALKFGE-GKELPKSLGLILVVLICLFVLAYGRSWGPMGWLVPSELFPLETRSAGQSVVVCVNLFFTALIAQCFL 445          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.350e-70
Identity = 136/231 (58.87%), Postives = 168/231 (72.73%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            +L  GSLL+ +TP SLIER + EEGK  LRKIRG D I  E+  +V A  IA +VK P+R LLK  +RP  +I + LQ+FQQ TGINAIMFYAPVLF+T+GFG  A+L S VITG++NVL+T V IY VD+ GRR LLL++ + M + Q +I IIL  K    +  L    A++VVI +C ++  FAWSWGPLGWLIPSETFPLETRSAG +V V  N+ FTFVIAQAFLS
Sbjct:  210 ILLFGSLLIIETPTSLIERNKNEEGKEALRKIRGVDDINDEYESIVHACDIASQVKDPYRKLLKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILA-KDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLS 439          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 3.752e-68
Identity = 130/231 (56.28%), Postives = 167/231 (72.29%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGFAVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            +L  GSLL+ +TP SLIER + +EGK  L+KIRG + ++ E+  +V A  IA++VK P+  L+K  +RP  VI + LQ FQQ TGINAIMFYAPVLF+T+GFG  A+L S V+TG +NVLST V I+ VDK GRR LLL++ + M + Q VI IIL  K  D +  L    A++VVI +C ++  FAWSWGPLGWLIPSETFPLETR+ G ++ V  N+ FTFVIAQAFLS
Sbjct:  211 ILLFGSLLICETPTSLIERNKTKEGKETLKKIRGVEDVDEEYESIVHACDIARQVKDPYTKLMKPASRPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTVGFGNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILA-KDLDVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRTEGFALAVSCNMFFTFVIAQAFLS 440          
BLAST of CX301628 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.358e-68
Identity = 128/232 (55.17%), Postives = 165/232 (71.12%), Query Frame = 1
Query:   40 LLTVGSLLVTDTPNSLIERGRFEEGKAVLRKIRGTDKIEPEFLELVEASRIAKEVKHPFRNLLKRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFKTLGFGGSASLYSTVITGAVNVLSTLVSIYSVDKVGRRMLLLEAGIQMFLSQTVIAIILGIKVKDHSEDLHTGF-AVLVVIMICTFISAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFVIAQAFLS 732
            ++ VG   + DTPNS++ERG  E+ K +L+KIRGT ++E EF EL  A   AK+VKHP+ N+++ R RPQL     +  FQQ TGIN IMFYAPVLFKT+GFG  ASL S VITG VNVLST+VSIYSVDK GRR L L+ G QM ++Q  +  ++G K   + E   +G  A +++ +IC +++ FAWSWGPLGWL+PSE  PLE RSAGQS+ V VN+ FTF I Q FL+
Sbjct:  216 MMLVGCFFLPDTPNSILERGNKEKAKEMLQKIRGTMEVEHEFNELCNACEAAKKVKHPWTNIMQARYRPQLTFCTFIPFFQQLTGINVIMFYAPVLFKTIGFGNDASLISAVITGLVNVLSTIVSIYSVDKFGRRALFLQGGFQMIVTQIAVGSMIGWKFGFNGEGNLSGVDADIILALICLYVAGFAWSWGPLGWLVPSEICPLEIRSAGQSLNVSVNMFFTFFIGQFFLT 447          
The following BLAST results are available for this feature:
BLAST of CX301628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
STP13_ARATH3.962e-11084.85Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
STP7_ARATH4.273e-8060.17Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
STA_RICCO6.822e-7860.17Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
STC_RICCO5.405e-7558.62Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP1_ARATH8.629e-7357.08Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP12_ARATH1.472e-7258.19Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP14_ARATH1.627e-7157.58Sugar transport protein 14 OS=Arabidopsis thaliana... [more]
STP6_ARATH2.350e-7058.87Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STP8_ARATH3.752e-6856.28Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP11_ARATH8.358e-6855.17Sugar transport protein 11 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC08011G12SK PhyRootSw1 Citrus sinensis cDNA clone C08011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301628 ID=CX301628; Name=CX301628; organism=Citrus sinensis; type=EST; length=744bp
GAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGCTCCTGACCGT
GGGATCCCTCCTGGTGACAGACACTCCTAATAGTCTTATTGAACGCGGTC
GTTTCGAAGAAGGGAAGGCCGTGCTCAGAAAGATTAGGGGCACTGACAAG
ATTGAACCTGAGTTCTTGGAGCTTGTTGAGGCTAGTCGTATAGCCAAAGA
AGTAAAGCACCCTTTCAGAAATCTGCTCAAGCGTAGGAACCGGCCCCAGC
TTGTCATTGCTGTTGCCTTGCAGATCTTCCAGCAGTGTACAGGAATCAAT
GCGATCATGTTTTATGCCCCAGTCCTGTTTAAAACGTTGGGATTTGGCGG
CAGTGCTTCTCTTTACTCAACTGTGATTACAGGGGCAGTTAACGTCCTCT
CAACACTAGTATCAATCTACTCGGTGGACAAAGTGGGACGTCGGATGCTA
TTACTCGAAGCTGGAATTCAAATGTTCTTGTCTCAGACTGTGATAGCAAT
CATACTTGGAATTAAGGTTAAGGATCACTCGGAAGATTTACACACTGGCT
TTGCCGTCCTAGTGGTTATTATGATTTGCACTTTCATCTCTGCCTTTGCT
TGGTCTTGGGGACCTCTCGGATGGCTGATTCCCAGCGAAACATTCCCGTT
AGAGACGCGATCAGCTGGACAGAGTGTTACTGTTTGTGTGAACTTGCTGT
TCACTTTTGTGATAGCTCAAGCATTCCTTTCATGCTCTGCCATT
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