CX301609

Overview
NameCX301609
Unique NameCX301609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length326
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.258e-38
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGD HGQFYD+LNIF+L G PS++NPYLFNGDFVDRGSFS+EVI  L A+K   P+ +HL RGNHE+KSMNK+YGFEGEV         ++F E+FCCLPL ++++
Sbjct:  297 VCGDVHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFAFKCMCPSAIHLARGNHESKSMNKIYGFEGEVRSKLSEIFVELFAEVFCCLPLAHVIN 403          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.561e-38
Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGD HGQFYD+LNIF+L G PS+ENPYLFNGDFVDRGSFSVE+I  L A+K   P+ ++L RGNHE+KSMNK+YGFEGEV      K  D+F E+FC LPL ++++
Sbjct:  279 VCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEIILTLFAFKCMCPSSIYLARGNHESKSMNKIYGFEGEVRSKLSEKFVDLFAEVFCYLPLAHVIN 385          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.674e-34
Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGDTHGQFYD+LNIF+L G PS+ NPY+FNGDFVDRGSFSVEVI  L  +K   P+  HL RGNHE  +MN++YGFEGEV   Y +++Y++F E+F  LPL   ++
Sbjct:  239 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCIN 345          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.674e-34
Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGDTHGQFYD+LNIF+L G PS+ NPY+FNGDFVDRGSFSVEVI  L  +K   P+  HL RGNHE  +MN++YGFEGEV   Y +++Y++F E+F  LPL   ++
Sbjct:  239 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCIN 345          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.674e-34
Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGDTHGQFYD+LNIF+L G PS+ NPY+FNGDFVDRGSFSVEVI  L  +K   P+  HL RGNHE  +MN++YGFEGEV   Y +++Y++F E+F  LPL   ++
Sbjct:  239 VCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCIN 345          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.268e-30
Identity = 59/102 (57.84%), Postives = 73/102 (71.57%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPL 307
            +CGDTHGQ++D+LNIFKL G PS  N YLFNGDFVDRGS+S EV   L A+K   P+ + + RGNHE   MNK+YGFEGE    Y+ + ++IF E F  LPL
Sbjct:  214 ICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFSLLPL 315          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.533e-27
Identity = 54/107 (50.47%), Postives = 73/107 (68.22%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            VCGDTHGQFYDVLN+F+  G    ++ YLFNGDFVDRGS+S EV       K  +PN   L RGNHE+ +MNK+YGFE E  + Y  +++++F + F  LPL  +++
Sbjct:  246 VCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQRIFNMFAQSFESLPLATLIN 352          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.570e-24
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            +CGD HGQ+YD+L +F+  G+P   N YLF GD+VDRG  S+E I  LLA+K   P    + RGNHE  S+N++YGF  E    Y+SK++  F + F CLP+  I+D
Sbjct:   57 ICGDIHGQYYDLLRLFEYGGFPPQSN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNSKLWKAFTDCFNCLPVAAIID 162          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.570e-24
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            +CGD HGQ+YD+L +F+  G+P + N YLF GD+VDRG  S+EVI  LLA+K   P    + RGNHE  S+N++YGF  E    Y+ K++  F + F CLP+  I+D
Sbjct:   60 ICGDIHGQYYDLLRLFEYGGFPPEAN-YLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIID 165          
BLAST of CX301609 vs. ExPASy Swiss-Prot
Match: GLC7B_CAEEL (Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis elegans GN=gsp-2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.969e-24
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 2
Query:    2 VCGDTHGQFYDVLNIFKLKGYPSDENPYLFNGDFVDRGSFSVEVIXXLLAWKAFNPNCMHLTRGNHEAKSMNKLYGFEGEVLHTYDSKVYDIFCEIFCCLPLVYILD 322
            +CGD HGQ+YD+L +F+  G+P + N YLF GD+VDRG  S+E I  LLA+K   P    L RGNHE  S+N++YGF  E    Y+ K++  F + F CLP+  I+D
Sbjct:   60 ICGDVHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIID 165          
The following BLAST results are available for this feature:
BLAST of CX301609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PPP5_SOLLC4.258e-3863.55Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
PPP5_ARATH5.561e-3864.49Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
PPP5_RAT1.674e-3460.75Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]
PPP5_MOUSE1.674e-3460.75Serine/threonine-protein phosphatase 5 OS=Mus musc... [more]
PPP5_HUMAN1.674e-3460.75Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]
PPT1_SCHPO3.268e-3057.84Serine/threonine-protein phosphatase T OS=Schizosa... [more]
PPT1_YEAST7.533e-2750.47Serine/threonine-protein phosphatase T OS=Saccharo... [more]
PP1_DICDI4.570e-2447.66Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
PP11_SCHPO4.570e-2447.66Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
GLC7B_CAEEL5.969e-2447.66Serine/threonine-protein phosphatase PP1-beta OS=C... [more]

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Properties
Property NameValue
Genbank descriptionC08011F05SK PhyRootSw1 Citrus sinensis cDNA clone C08011F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301609 ID=CX301609; Name=CX301609; organism=Citrus sinensis; type=EST; length=326bp
GGTTTGTGGCGATACTCATGGTCAATTCTATGATGTCCTCAATATTTTCA
AGCTCAAAGGATATCCTTCTGATGAGAATCCCTACTTGTTCAACGGAGAT
TTCGTCGATAGAGGCTCTTTCTCAGTTGAAGTTATTGNTNGCCTTTTAGC
TTGGAAGGCTTTCAACCCCAACTGCATGCATCTTACTAGAGGAAATCATG
AAGCTAAGAGCATGAATAAACTTTACGGATTTGAAGGAGAAGTTCTTCAT
ACGTACGATTCCAAGGTCTATGATATTTTCTGCGAAATCTTCTGCTGCCT
TCCTTTGGTTTACATCCTCGACACAA
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