CX301607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.521e-39 Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTEGKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRK--NRVKIGQSKGAVPSSLHDNMAGVD 475 K N ++SRRKNRKAHF A S RR MSSPLSKDL + +VRS+P+RKDDEV+V+RG FK EGKV++VYR+K+VIH+E+ TR+K NG T++VG++ASNV ITKL++DK+RK++L+RK R + KG S D M VD Sbjct: 2 KFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKG-TKFSAEDVMENVD 146
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.521e-39 Identity = 83/146 (56.85%), Postives = 110/146 (75.34%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTEGKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDR--KNRVKIGQSKGAVPSSLHDNMAGVD 475 K N T+SRRKNRKAHF A+S ERR MSSPLS DL Q+++VRS+P+RKDDEV+++RG +K EGKVV+VYR+K+VIH+E+ TR+K NG T++VGI S V ITKL++DK+RK++L+R K R + KG +S D M VD Sbjct: 2 KYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKGTKFTS-EDVMQNVD 146
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_DICDI (60S ribosomal protein L26 OS=Dictyostelium discoideum GN=rpl26 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.104e-37 Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTEGKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVKIGQSKGAVPSSLHDN 460 K N N ++SRRK+RKAHF A+S ERR RMS+ LS DL +++VRS+P+RKDDEVRV+ G K+ EGKVV YRKKYVIH++K T K NG T +G+ SNV +TKLK+DK+RKA+L+RKNR + KG V S N Sbjct: 2 KRNTNVSSSRRKSRKAHFTASSGERRIRMSAALSHDLRTKYNVRSLPIRKDDEVRVVCGDNKNHEGKVVACYRKKYVIHIDKLTVTKTNGNTAQIGVSPSNVILTKLKLDKDRKALLERKNRT-VAADKGKVKVSADVN 139
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26L_HUMAN (60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.041e-36 Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKGAVPSSLHDNM 463 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG L + M Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEELIEKM 143
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.167e-36 Identity = 78/132 (59.09%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKG 433 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKG 133
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.167e-36 Identity = 78/132 (59.09%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKG 433 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKG 133
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_HUMAN (60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.167e-36 Identity = 78/132 (59.09%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKG 433 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKG 133
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_BOVIN (60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.167e-36 Identity = 78/132 (59.09%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKG 433 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKG 133
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_RAT (60S ribosomal protein L26 OS=Rattus norvegicus GN=Rpl26 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36 Identity = 78/132 (59.09%), Postives = 103/132 (78.03%), Query Frame = 2 Query: 44 KLNNNTTASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKG 433 K N T+ R KNRK HF A S RRK MSSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG Sbjct: 2 KFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIRPSKVVITRLKLDKDRKKILERKAKSRQVGKEKG 133
BLAST of CX301607 vs. ExPASy Swiss-Prot
Match: RL26_AILME (60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35 Identity = 76/136 (55.88%), Postives = 104/136 (76.47%), Query Frame = 2 Query: 62 TASRRKNRKAHFAATSVERRKRMSSPLSKDLFQRFHVRSIPVRKDDEVRVLRGKFKSTE-GKVVEVYRKKYVIHVEKCTRDKANGQTIHVGIDASNVEITKLKMDKNRKAILDRKNRVK-IGQSKGAVPSSLHDNM 463 T+ R KNRK HF A S RRK +SSPLSK+L Q+++VRS+P+RKDDEV+V+RG +K + GKVV+VYRKKYVI++E+ R+KANG T+HVGI S V IT+LK+DK+RK IL+RK + + +G+ KG ++ M Sbjct: 8 TSDRSKNRKRHFNAPSHIRRKTLSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETNEKM 143 The following BLAST results are available for this feature:
BLAST of CX301607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301607 ID=CX301607; Name=CX301607; organism=Citrus sinensis; type=EST; length=763bpback to top |