CX301598

Overview
NameCX301598
Unique NameCX301598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX301598_ssr187 microsatellite CX301598_ssr187:187..198. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4978 contig Csv1_Contig4978:1..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.009e-68
Identity = 134/218 (61.47%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    1 KRREEADNLVRFIYNQC-RESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKEDG-GPGFEEEEHVESLFVALQHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            KR EEADNLVR+I N+  +   +A  V+D+RLA R Y GNV RKMMF  R+FG+G EDG GPG EE EHVESLF  L HLY+F LSDYVPW+R  DLEGHEK+VS AM+  +KY+D  +DER+ Q R+   K+      D LD+ I AKD +G P LS +EIK+Q  +L LATVDNPSNAAEW +AEMIN+P I++KA EEIDRVVGK+RLV ESD+P
Sbjct:  159 KRTEEADNLVRYINNRSVKNRGNAFVVIDLRLAVRQYSGNVARKMMFGIRHFGKGSEDGSGPGLEEIEHVESLFTVLTHLYAFALSDYVPWLRFLDLEGHEKVVSNAMRNVSKYNDPFVDERLMQWRNGKMKEPQ----DFLDMFIIAKDTDGKPTLSDEEIKAQVTELMLATVDNPSNAAEWGMAEMINEPSIMQKAVEEIDRVVGKDRLVIESDLP 372          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 255.758 bits (652), Expect = 1.457e-67
Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 1
Query:    1 KRREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKEDGGPGFEEEEHVESLFVALQHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            KR +EADNL R++YN   ++A+    VDVR   RHYCGNVIR++MFNRRYFGE + DGGPG  E  H++++F +L  LY+F +SDY+PW+R  DL+GHEKIV  A    N+ HD++ID+R +Q +  + ++      D LDVLI+ KD  G+PLL+I+E+K+Q  D+T A VDNPSNA EWA+AEM+N PE++ KA EE+DRVVG+ERLVQESD+P
Sbjct:  186 KRTDEADNLTRYVYNLATKAATGDVAVDVRHVARHYCGNVIRRLMFNRRYFGEPQADGGPGPMEVLHMDAVFTSLGLLYAFCVSDYLPWLRGLDLDGHEKIVKEANVAVNRLHDTVIDDRWRQWKSGERQEME----DFLDVLITLKDAQGNPLLTIEEVKAQSQDITFAAVDNPSNAVEWALAEMVNNPEVMAKAMEELDRVVGRERLVQESDIP 397          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.047e-57
Identity = 115/217 (53.00%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    1 KRREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKE-DGGPGFEEEEHVESLFVALQHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            KR EE D+L  ++YN  + S S    VD R  TRHYCGN I+K+MF  R F +    DGGP  E+ EH+E++F AL   ++F +SDY+P +   DL GHEKI+  +    +KYHD IIDER++  R     +      D LD+ IS KDE G+PLL+ DEIK    +L +A  DNPSNA EWA+AEM+N+PEILRKA EEIDRVVGKERLVQESD+P
Sbjct:  174 KRSEENDHLTAWVYNMVKNSGS----VDFRFMTRHYCGNAIKKLMFGTRTFSKNTAPDGGPTVEDVEHMEAMFEALGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIE----DFLDIFISIKDEQGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIP 382          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.578e-56
Identity = 116/217 (53.46%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    1 KRREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKE-DGGPGFEEEEHVESLFVALQHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            KR EE D+L  ++YN    S S    VD R  TRHYCGN I+K+MF  R F +    +GGP  E+ EH+E++F AL   +SF +SDY+P +   DL GHEKI+  +    +KYHD IID R++  R  + KK    D   LD+ IS KDE G+PLL+ DEIK    +L +A  DNPSNA EWA+AEM+N+PEILRKA EEIDRVVGKERLVQESD+P
Sbjct:  175 KRAEENDHLTAWVYNMVNNSDS----VDFRFVTRHYCGNAIKKLMFGTRTFSQNTAPNGGPTAEDIEHMEAMFEALGFTFSFCISDYLPILTGLDLNGHEKIMRDSSAIMDKYHDPIIDARIKMWR--EGKKTQIEDF--LDIFISIKDEEGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIP 383          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 9.798e-56
Identity = 112/216 (51.85%), Postives = 142/216 (65.74%), Query Frame = 1
Query:    4 RREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKE-DGGPGFEEEEHVESLFVALQHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            R EE D+L  ++YN  + S      VD+R  TRHYCGN I+++MF  R F E  E DGGP  E+ EH++++F  L   ++F +SDY+P +   DL GHEKI+  +    +KYHD IIDER++  R     +      D LD+ IS KDE G PLL+ DEIK    +L +A  DNPSNA EWAIAEMIN+PEIL KA EEIDRVVGKER VQESD+P
Sbjct:  177 RAEETDHLTAWLYNMVKNSEP----VDLRFVTRHYCGNAIKRLMFGTRTFSEKTEADGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIE----DFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKERFVQESDIP 384          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 92/219 (42.01%), Postives = 135/219 (61.64%), Query Frame = 1
Query:    4 RREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGK---EDGGPGFEEEEHVESLFVALQHLYSFTLSDYVP-WMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDVP 648
            R  EADNL+ ++++  + S +    VDVR  +R Y   V  +M+F RR+  +     +DG  G  E+ H+E +F  L  L SF+ +DYV  W+R ++++G EK V+        Y++ IIDERVQ  R    K       D LD  I+ KD+NG  L++ DEIK+QC++  +A +DNP+N  EW + EM+  PEILRKA +E+D VVG++RLVQESD+P
Sbjct:  164 RTIEADNLIAYVHSMYQRSET----VDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGNAEKHHLEVIFNTLNCLPSFSPADYVERWLRGWNVDGQEKRVTENCNIVRSYNNPIIDERVQLWREEGGKAAVE---DWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGRDRLVQESDIP 375          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37
Identity = 88/218 (40.37%), Postives = 131/218 (60.09%), Query Frame = 1
Query:    4 RREEADNLVRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGK---EDGGPGFEEEEHVESLFVALQHLYSFTLSDYVP-WMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISAKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDV 645
            R  EADNL+ +I++  + S +    VDVR  +R Y   V  +M+F RR+  +     +DG  G  E+ H+E +F  L  L  F+  DYV  W+  ++++G E+     +     Y++ IIDERV+  R    K       D LD  I+ KD+NG+ L++ DEIK+QC++  +A +DNP+N  EW + EM+  PEILRKA +E+D VVGK+RLVQESD+
Sbjct:  163 RTIEADNLIAYIHSMYQRSET----VDVRELSRVYGYAVTMRMLFGRRHVTKENMFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVDRWLGGWNIDGEEERAKVNVNLVRSYNNPIIDERVEIWREKGGKAAVE---DWLDTFITLKDQNGNYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDI 373          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.337e-20
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  241 FTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLISA-KDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDV 645
            F +SD++ +++ FDL+G  + +       +   D II +R ++RR +     A    D+LDVL+   +DEN +  L    IK+  MD+ +A  D  + + EWA+AE+IN P++L KA +EID VVGK R+V+ESD+
Sbjct:  216 FNVSDFIWYLKPFDLQGFNRKIKETRDRFDVVVDGIIKQRQEERRKNKETGTAKQFKDMLDVLLDMHEDENAEIKLDKKNIKAFIMDIFVAGTDTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDI 351          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.930e-19
Identity = 50/136 (36.76%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  241 FTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLIS-AKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDV 645
            F +SD+V +++ FDL+G  K +       +   D II +R ++RR+ +         D+LDVL   ++DE+ +  L+ + IK+  +D+ +A  D  +   EWA+AE+IN P +L KA +E+D VVGK R+V+ESD+
Sbjct:  217 FNISDFVSFLKRFDLQGFNKRLEKIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDI 352          
BLAST of CX301598 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.292e-19
Identity = 63/228 (27.63%), Postives = 111/228 (48.68%), Query Frame = 1
Query:   28 VRFIYNQCRESASAATVVDVRLATRHYCGNVIRKMMFNRRYFGEGKEDGGP-----------------GFEEEEHVESLFVAL----QHLYSFTLSDYVPWMRVFDLEGHEKIVSAAMKTANKYHDSIIDERVQQRRHHDNKKEAHNDLDLLDVLIS-AKDENGDPLLSIDEIKSQCMDLTLATVDNPSNAAEWAIAEMINQPEILRKATEEIDRVVGKERLVQESDV 645
            V+FI   C        ++D  L  R        K +  +   GE  + GG                    E+E+  E + + +    + + +F +SD++ +++ FDL+G  K +       +   D II +R ++RR++          D+LDVL+   +D++ +  L+ + IK+  MD+ +A  D  +   EWA+AE+IN P +L KA +EID VVG  R+++ESD+
Sbjct:  117 VKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRIRKTRIRFDAVLDRIIKQREEERRNNKEIGGTRQFKDILDVLLDIGEDDSSEIKLTKENIKAFIMDIFVAGTDTSAATMEWAMAELINNPCVLEKARQEIDAVVGNSRIIEESDI 344          
The following BLAST results are available for this feature:
BLAST of CX301598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
C79A2_ARATH1.009e-6861.47Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C79A1_SORBI1.457e-6755.56Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C79B2_ARATH1.047e-5753.00Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79B1_SINAL2.578e-5653.46Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79B3_ARATH9.798e-5651.85Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79F1_ARATH7.537e-4042.01Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]
C79F2_ARATH5.972e-3740.37Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C93A1_SOYBN1.337e-2038.24Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C93A3_SOYBN1.930e-1936.76Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C93A2_SOYBN3.292e-1927.63Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC08011E05SK PhyRootSw1 Citrus sinensis cDNA clone C08011E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301598 ID=CX301598; Name=CX301598; organism=Citrus sinensis; type=EST; length=650bp
AAGAGAAGAGAAGAAGCTGACAATCTTGTTCGATTCATTTATAACCAATG
CCGCGAAAGTGCTTCTGCTGCAACAGTTGTAGATGTAAGACTTGCAACCC
GCCATTATTGTGGGAACGTTATTAGGAAGATGATGTTCAACAGGAGATAC
TTTGGCGAAGGAAAAGAAGATGGAGGTCCCGGATTTGAAGAAGAAGAACA
CGTTGAATCACTCTTCGTTGCACTCCAACACCTTTATTCCTTCACTCTTT
CAGATTACGTTCCCTGGATGAGAGTCTTCGATCTAGAAGGCCATGAAAAA
ATTGTAAGTGCGGCCATGAAAACTGCCAACAAGTATCACGATTCCATTAT
AGACGAGAGAGTACAACAACGGAGACATCATGACAACAAGAAGGAAGCTC
ACAACGACCTGGACTTGCTAGATGTTCTCATTTCAGCAAAGGATGAAAAT
GGGGATCCATTGTTATCCATAGATGAGATCAAATCTCAATGCATGGATCT
GACACTTGCAACAGTGGATAATCCATCGAATGCAGCAGAGTGGGCAATAG
CGGAGATGATCAACCAGCCTGAAATTCTCCGAAAAGCAACAGAGGAGATC
GATAGAGTTGTTGGAAAAGAAAGACTTGTTCAGGAATCTGACGTCCCGCA
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