CX301595

Overview
NameCX301595
Unique NameCX301595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.744e-83
Identity = 151/205 (73.66%), Postives = 165/205 (80.49%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY+EELW+KKQSDV+RFL RVR W+YRQ   I R+  PTRPDKA +LGYKAKQGYVVYR+ VRRGGRKRP  KGIVYGKPKNQGI QLKF R+LRSVAEERAGR    LRVLNSYWINQD+TYKY+EV+LVD  H  IRNDPRINWI N VHKHRE RGLTSAGKK+RGLR +GH  +     S RA WKR NT    RYR
Sbjct:    1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEYRQLPGIVRITHPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEVVLVDQAHTVIRNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKA-RPSKRATWKRNNTLSLRRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.170e-82
Identity = 150/205 (73.17%), Postives = 163/205 (79.51%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAY Y+ ELWRKKQSDV+RFL RVR W+YRQ   I RV +PTRPDKA +LGYKAKQGYVVYR+ V+RGGRKRP  KGIVYGKP NQG+ QLKF R  RSVAEERAGR    LRVLNSYWIN+D+TYKYFEVILVD  H AIRNDPRINWI NPVHKHRE RGLTSAGKK+RGLR +GH  +N    S RA WKR  T    RYR
Sbjct:    1 MGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVKRGGRKRPVPKGIVYGKPTNQGVTQLKFQRTKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGH-LHNKAPPSRRANWKRNQTLSLPRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.170e-82
Identity = 150/205 (73.17%), Postives = 166/205 (80.98%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY+EELW+KKQSDV+RFL RVR W++RQ   I RV +P+RPDKA +LGYKAKQGYVVYR+ VRRGGRKRP  KGIVYGKPKNQGI QLKF R+LRSVAEERAGR    LRVLNSYWINQD+TYKY+E+ILVD  H AIR DPRINWI N VHKHRE RGLTSAGKK+RGLR +GH  +     S RA WKR NT    RYR
Sbjct:    1 MGAYKYIEELWKKKQSDVMRFLQRVRCWEFRQLPGIVRVTRPSRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKNQGITQLKFQRSLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEIILVDQAHSAIRKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKA-RPSKRATWKRNNTLSLRRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_MOUSE (60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_MACFA (60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_HUMAN (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL15_BOVIN (60S ribosomal protein L15 OS=Bos taurus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 303.138 bits (775), Expect = 9.222e-82
Identity = 144/205 (70.24%), Postives = 167/205 (81.46%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY++ELWRKKQSDV+RFLLRVR WQYRQ + + R  +PTRPDKA +LGYKAKQGYV+YRI VRRGGRKRP  KG  YGKP + G+NQLKF R+L+SVAEERAGR    LRVLNSYW+ +D+TYK+FEVIL+DP H AIR +P   WI  PVHKHRE RGLTSAG+K RGL  KGH+ ++TIGGS RAAW+RRNT    RYR
Sbjct:    1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
[Close]
BLAST of CX301595 vs. ExPASy Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.054e-81
Identity = 145/205 (70.73%), Postives = 166/205 (80.98%), Query Frame = 3 
Query:   39 MGAYKYLEELWRKKQSDVLRFLLRVRAWQYRQTNKIQRVNKPTRPDKAHKLGYKAKQGYVVYRIAVRRGGRKRPNHKGIVYGKPKNQGINQLKFVRNLRSVAEERAGRVAANLRVLNSYWINQDATYKYFEVILVDPNHVAIRNDPRINWIVNPVHKHRERRGLTSAGKKHRGLRVKGHRANNTIGGSHRAAWKRRNTKVFLRYR 653
            MGAYKY+ ELWRKKQSDV+RFL RVR W+YRQ   I R+ +PTRPDKA +LGYKAKQG+VVYR+ VRRGGRKRP  KGIVYGKP NQG+ QLKF R+ RSVAEERAGR    LRV+NSYW+N+D+TYKY+E+ILVDP H A+RNDPRINWI NPVHKHRE RGLTS GKK+RGLR KGH  N+    S RA WK+ N+    RYR
Sbjct:    1 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLVRPTRPDKARRLGYKAKQGFVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVVNSYWLNEDSTYKYYEIILVDPAHNAVRNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHN-NHKNRPSRRATWKKNNSLSLRRYR 204
The following BLAST results are available for this feature:
BLAST of CX301595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15B_PICMA3.744e-8373.6660S ribosomal protein L15-2 OS=Picea mariana GN=SB... [more]
RL15_PETHY3.170e-8273.1760S ribosomal protein L15 OS=Petunia hybrida GN=RP... [more]
RL15A_PICMA3.170e-8273.1760S ribosomal protein L15-1 OS=Picea mariana GN=SB... [more]
RL15_RAT9.222e-8270.2460S ribosomal protein L15 OS=Rattus norvegicus GN=... [more]
RL15_PONAB9.222e-8270.2460S ribosomal protein L15 OS=Pongo abelii GN=RPL15... [more]
RL15_MOUSE9.222e-8270.2460S ribosomal protein L15 OS=Mus musculus GN=Rpl15... [more]
RL15_MACFA9.222e-8270.2460S ribosomal protein L15 OS=Macaca fascicularis G... [more]
RL15_HUMAN9.222e-8270.2460S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
RL15_BOVIN9.222e-8270.2460S ribosomal protein L15 OS=Bos taurus GN=RPL15 P... [more]
RL151_ARATH2.054e-8170.7360S ribosomal protein L15-1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionC08011E01SK PhyRootSw1 Citrus sinensis cDNA clone C08011E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301595 ID=CX301595; Name=CX301595; organism=Citrus sinensis; type=EST; length=706bp
AATTCGGCACGAGGTTAATATCGATTAATTAAACAAAAATGGGAGCATAC
AAGTACCTCGAAGAGCTCTGGAGAAAGAAGCAATCTGATGTGCTTCGTTT
CTTGTTACGTGTTCGTGCTTGGCAATATCGTCAAACCAACAAGATCCAAC
GTGTCAACAAGCCAACTCGCCCAGACAAGGCTCACAAGTTAGGATACAAG
GCCAAGCAAGGATATGTTGTCTACCGTATCGCTGTCCGTCGTGGTGGCCG
CAAGAGACCAAACCACAAGGGTATTGTCTACGGTAAACCAAAGAACCAAG
GTATCAACCAGTTAAAGTTCGTCCGCAACTTACGCAGTGTTGCCGAGGAA
CGTGCTGGTCGTGTTGCTGCCAACTTACGTGTGTTGAACTCTTACTGGAT
CAACCAAGATGCCACCTACAAGTACTTCGAGGTCATCTTAGTCGATCCTA
ACCACGTTGCCATCAGAAACGATCCTCGCATCAACTGGATCGTTAACCCT
GTTCACAAGCACCGCGAACGCCGTGGACTTACCTCCGCTGGCAAGAAGCA
CCGCGGTCTCAGAGTCAAGGGTCACAGAGCCAACAACACCATCGGTGGTT
CCCACAGAGCTGCCTGGAAGCGCCGCAACACCAAGGTCTTCCTCAGATAC
CGTTAATCAACTTCTTCACCTCCTCCATAATGCACTTAGCGTTGTTATTC
CTCGCT
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