CX301593

Overview
NameCX301593
Unique NameCX301593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX301593 vs. ExPASy Swiss-Prot
Match: MU157_SCHPO (Meiotically up-regulated gene 157 protein OS=Schizosaccharomyces pombe GN=mug157 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.780e-50
Identity = 103/215 (47.91%), Postives = 134/215 (62.33%), Query Frame = 3 
Query:  114 TGFRPSDDPCQYHYLIPANMMAVVTLGYVEEMALEIFGDKHLAGRARDLKNEIDDAIHKWGVVESGGYGKIYAYEVDGLGNHFLADDANVPSLLSIPYLNYTSKHDPDGQIYRQTRSFILS-KGNPYYREGTAAKGIGSPHTPPDTIWPMALIMDALTTDDDAHVRSIITTLEQTDANTNRMHESFSKDHPYTFTREWFSWANSLFAELVLKKLD 755
            + FRPSDD C   Y IPAN M VV L ++ +M L+  G   +A  A    N+I   I + G+V+   +GK+YAYEVDG G+    DDANVPSLLS+PYL +  + DP   +Y  TR  ILS +GNPYY +G    GIG PH     +WPM+LI+ ALT+DDD  + S++  L+ + A    MHES       +FTR WFSWANSLFAEL+L  L+
Sbjct:  288 SAFRPSDDACVLQYFIPANAMMVVELSHLNQM-LQASGHADIARTALVWANKIQKGIDQHGIVDHPKFGKVYAYEVDGYGSILFMDDANVPSLLSLPYLGFVERDDP---VYVNTRKMILSSEGNPYYLKGKVISGIGGPHIGLRNVWPMSLIVQALTSDDDDEIMSLLDVLKHSTAGLGLMHESVDVSSFKSFTRPWFSWANSLFAELILDLLE 498
The following BLAST results are available for this feature:
BLAST of CX301593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MU157_SCHPO4.780e-5047.91Meiotically up-regulated gene 157 protein OS=Schiz... [more]
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Properties
Property NameValue
Genbank descriptionC08011D11SK PhyRootSw1 Citrus sinensis cDNA clone C08011D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301593 ID=CX301593; Name=CX301593; organism=Citrus sinensis; type=EST; length=761bp
AATTCGGCACGAGGATCACAGAACAGAAACACCACGAAAAATCCCCTTAT
AGTTACCCGGAATTGTCGAATCACGGGAAGGGCGGCGCACTGGGATACAC
CGGAATGACGTGGACTGGATTCAGACCATCAGACGATCCATGCCAATACC
ACTATCTTATCCCGGCAAATATGATGGCAGTGGTGACTTTGGGATACGTG
GAAGAGATGGCGCTGGAAATTTTCGGAGACAAACATTTGGCAGGCAGAGC
TAGAGACCTCAAAAATGAGATCGACGATGCCATCCACAAGTGGGGAGTTG
TGGAAAGCGGAGGCTACGGCAAAATCTACGCATACGAAGTCGACGGATTA
GGCAACCACTTCCTTGCAGATGATGCCAACGTCCCAAGCTTGTTGTCAAT
ACCATACTTGAACTATACTTCGAAGCACGACCCTGATGGGCAAATTTACC
GGCAAACCAGGAGTTTCATTCTGAGTAAAGGAAACCCCTATTATCGTGAA
GGCACAGCAGCCAAGGGCATAGGGAGCCCACATACACCCCCCGACACCAT
CTGGCCAATGGCATTGATCATGGATGCACTGACAACAGATGATGATGCAC
ACGTTCGGTCCATCATCACCACCCTCGAACAAACCGATGCCAACACCAAC
AGAATGCACGAATCTTTCAGCAAAGACCATCCATACACTTTCACCAGGGA
GTGGTTTTCGTGGGCAAATTCTTTGTTCGCCGAACTCGTTCTGAAGAAGT
TAGATGTATTA
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