CX301583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.395e-28 Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN GR+KH RGHV+ +RCS+ K PKDKAIKRF+VRNIV+ +A+RD+++AS +EGY LPKLY K YCV A+H +VRVRS Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.395e-28 Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN GR+KH RGHV+ +RCS+ K PKDKAIKRF+VRNIV+ +A+RD+++AS +EGY LPKLY K YCV A+H +VRVRS Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.380e-28 Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN GR+KH RGHV +RCS+ K PKDKAIKRF+VRNIV+ +A+RD+++AS +EGY LPKLY K YCV A+H +VRVRS Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.181e-27 Identity = 54/88 (61.36%), Postives = 72/88 (81.82%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR+KHGRGHV VRC + ++A+PKDKAIKR+ +RN+V+T+A+RD+ +AS + Y +PKLYIK YCV A+H R+VRVRS Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHSRVVRVRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27 Identity = 56/88 (63.64%), Postives = 69/88 (78.41%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN GR+KHGRGHV +RCS+ AK PKDKAIKRF VRNIV+ +A+RD+++A +GY LPKLY K ++CV A+H IVRVRS Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR K GRGHV +RC++ A+ +PKDKAIK+F++RNIV+ +A+RDI +AS F+ Y LPKLY+K +YCV A+H ++VR RS Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR K GRGHV +RC++ A+ +PKDKAIK+F++RNIV+ +A+RDI +AS F+ Y LPKLY+K +YCV A+H ++VR RS Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_MOUSE (40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR K GRGHV +RC++ A+ +PKDKAIK+F++RNIV+ +A+RDI +AS F+ Y LPKLY+K +YCV A+H ++VR RS Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_MACFA (40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR K GRGHV +RC++ A+ +PKDKAIK+F++RNIV+ +A+RDI +AS F+ Y LPKLY+K +YCV A+H ++VR RS Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
BLAST of CX301583 vs. ExPASy Swiss-Prot
Match: RS26_HUMAN (40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.861e-27 Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 3 Query: 45 MTVKRRNHGRDKHGRGHVDRVRCSSTAKAIPKDKAIKRFLVRNIVDTSALRDIKDASAFEGYQLPKLYIKQYYCVEAAVHQRIVRVRS 308 MT KRRN+GR K GRGHV +RC++ A+ +PKDKAIK+F++RNIV+ +A+RDI +AS F+ Y LPKLY+K +YCV A+H ++VR RS Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88 The following BLAST results are available for this feature:
BLAST of CX301583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301583 ID=CX301583; Name=CX301583; organism=Citrus sinensis; type=EST; length=520bpback to top |