CX301582

Overview
NameCX301582
Unique NameCX301582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 9.840e-69
Identity = 125/171 (73.10%), Postives = 133/171 (77.78%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            M+NPKVFFD+TIGG  AGR+V EL  D  P TAENFR LCTGEKGVGK GKPLHYKGS FHR+IP FMCQ            ESIYG KF DENF  KHTGPG LSMANAGP TNGSQFFICT KT WL+GKH VFG+VVEGMDV+KK EAVGS SG  SKPVVI +CGQL
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 6.378e-68
Identity = 121/171 (70.76%), Postives = 136/171 (79.53%), Query Frame = 1
Query:    7 SNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            +NPKV+FD+T+GG  AGRIV EL  D  P TAENFR LCTGE+G+GK GKPLHYKGS+FHR+IP FMCQ            ESIYG KFKDENF  KHTGPG LSMANAG NTNGSQFFICT KTSWLDGKH VFG+VVEG++VV+ +E VGS SG TSKPVVI +CGQ+S
Sbjct:    3 TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.088e-67
Identity = 121/171 (70.76%), Postives = 138/171 (80.70%), Query Frame = 1
Query:    7 SNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            S+PKVFFD+TIGG  AG+IV EL  D  P TAENFR LCTGEKGVG+SGKPLH+KGS+FHR+IPNFMCQ            ESIYG KF+DENF+ KHTGPG LSMANAG NTNGSQFFICTVKT WLDGKH VFG+VVEG+DVVK +E +GS SG  +KPVVI +CG++S
Sbjct:    3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.424e-67
Identity = 123/172 (71.51%), Postives = 133/172 (77.33%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            MSNPKVFFD+ I GN AGRIV EL  D  P TAENFR LCTGEKGVG+SGKPLHYKGS FHR+IPNFMCQ            ESIYG KF DENF  +HTGPG LSMANAG  TNGSQFFICT KT WLDGKH VFGKV+EGM+VV+ +E VGS SG TS+PV I +CGQLS
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 4.134e-67
Identity = 121/172 (70.35%), Postives = 134/172 (77.91%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            M NP+VFFD+++GG  AGRIV EL  D  P TAENFR LCTGEKG G+SGKPLHYK S+FHR+IP FMCQ            ESIYG KF DENF  KHTGPG LSMANAGPNTNGSQFFICT KT WLDGKH VFG+VVEGMDVVK +E VGS SG T+K VV+++CGQLS
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.571e-66
Identity = 122/169 (72.19%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   10 NPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            NP+VFFDITIGG +AG++V EL  + VP TAENFR LCTGEKG+GKSGKPL YKGS+FHR+I NFMCQ            ESIYG KF DENF LKH G G LSMANAG NTNGSQFFIC   T WLDGKH VFG V EGMDVVKKMEA GSQSG T+KPVVI NCGQL
Sbjct:   11 NPRVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 1.571e-66
Identity = 123/171 (71.93%), Postives = 133/171 (77.78%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            M NPKV+FD+T+G   AGRIV EL  D VP TAENFR LCTGE+G+GKSGKPLHYKGSAFHR+IP FMCQ            ESIYG KFKDENF  KHTGPG LSM NAG NTNGSQFFICT KTSWLDGKH VFG+VVEGMDVV+ +E VGS SG TSK VV  +CGQL
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.571e-66
Identity = 121/172 (70.35%), Postives = 135/172 (78.49%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            M+ PKV+FD+TI G  AGRIV EL  D  P TAENFR LCTGEKGVG +GKPLH+KGS FHR+IPNFMCQ            ESIYG KF+DENF+ KHTGPG LSMANAG NTNGSQFFICTVKT WLDGKH VFG+VVEG+DVVK +E VGS SG  +KPVV+ +CGQLS
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.963e-65
Identity = 122/171 (71.35%), Postives = 132/171 (77.19%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQL 516
            MS  KVFFDITIGG  +GRIV EL  DVVP TA NFR LCTGE G+GKSGKPLH+KGS FHRIIPNFM Q            ESIYGEKF DENF  KHTGPG LSMANAGPNTNGSQFF+CTVKT WLDGKH VFG+VVEG+DVVK +E+ GSQSG   K  +I +CGQL
Sbjct:    1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171          
BLAST of CX301582 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 3.870e-65
Identity = 120/172 (69.77%), Postives = 134/172 (77.91%), Query Frame = 1
Query:    4 MSNPKVFFDITIGGNDAGRIVFELRKDVVPITAENFRCLCTGEKGVGKSGKPLHYKGSAFHRIIPNFMCQXXXXXXXXXXXXESIYGEKFKDENFDLKHTGPGDLSMANAGPNTNGSQFFICTVKTSWLDGKHTVFGKVVEGMDVVKKMEAVGSQSGATSKPVVIKNCGQLS 519
            M+NP+VFFD+T+GG  AGRIV EL  + VP TAENFR LCTGEKGVGKSGKPLHYKGS FHR+IP FMCQ            ESIYGEKF DE F  K   PG LSMANAGPNTNGSQFFICTV T WLDGKH VFG+VVEGMDVVK +E VG+++G+TSK V + +CGQLS
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
The following BLAST results are available for this feature:
BLAST of CX301582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
CYPH_SOLLC9.840e-6973.10Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CP19A_ARATH6.378e-6870.76Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19B_ARATH1.088e-6770.76Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CYPH_LUPLU2.424e-6771.51Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_CATRO4.134e-6770.35Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
PPIA_DICDI1.571e-6672.19Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYPH_BRANA1.571e-6671.93Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18C_ARATH1.571e-6670.35Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYP3_CAEEL2.963e-6571.35Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYPH_MAIZE3.870e-6569.77Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]

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Properties
Property NameValue
Genbank descriptionC08011C12SK PhyRootSw1 Citrus sinensis cDNA clone C08011C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301582 ID=CX301582; Name=CX301582; organism=Citrus sinensis; type=EST; length=562bp
ACGATGAGTAACCCCAAAGTCTTTTTTGATATTACTATTGGAGGTAATGA
TGCTGGTAGAATTGTCTTTGAATTACGTAAAGACGTAGTACCAATCACTG
CTGAAAATTTCAGATGTCTTTGTACTGGTGAAAAAGGAGTAGGTAAATCA
GGAAAACCTCTTCACTATAAAGGTAGTGCTTTCCACAGAATCATCCCCAA
CTTCATGTGTCAAGGAGGTGATTTTACTAAAGGAAATGGAACTGGAGGCG
AATCGATCTATGGAGAAAAATTTAAAGATGAAAACTTTGATTTAAAACAT
ACTGGACCTGGTGATCTTTCAATGGCCAATGCTGGACCAAACACTAATGG
AAGTCAATTCTTCATTTGTACTGTTAAAACATCATGGTTAGATGGAAAAC
ACACTGTCTTTGGCAAAGTTGTTGAAGGAATGGATGTTGTTAAAAAGATG
GAAGCTGTTGGTTCTCAGAGTGGAGCTACCTCCAAACCTGTTGTGATCAA
AAACTGTGGACAATTGAGTTAAATGAAATTTTATTGATAAACTACTAAAA
AAAAAAAAAAAA
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