CX301580

Overview
NameCX301580
Unique NameCX301580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.480e-103
Identity = 177/209 (84.69%), Postives = 195/209 (93.30%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAERENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWY+HHLFIIVY LLIVHGIKLYLTK WYQKTTWMYLAVP++LYA ERL RA RSSI+PVK++KVAVYPGNVL+LHM+KPQGFKYKSGQ+M VNC AVSPFEWHPFSITS+PGDDYLSVHIRTLGDWTR+L+TVFSEVC+P  AGKSGLLRA+  + +  FPK+LIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISI+KDIIN
Sbjct:  552 TGFNAFWYTHHLFIIVYALLIVHGIKLYLTKIWYQKTTWMYLAVPILLYASERLLRAFRSSIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDGNLPFPKVLIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIIN 760          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 375.17 bits (962), Expect = 1.933e-103
Identity = 179/211 (84.83%), Postives = 196/211 (92.89%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAE--RENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLFIIVYTLLIVHG KLY+TK WY+++TWMYL VP+VLYA ERL RA RSSI+ VKILKVAVYPGNVLALHMSKPQG+KYKSGQYMFVNCAAVSPFEWHPFSITS+PGDD+LSVHIRTLGDWTRQLKTVFSEVCQP P GKSGLLRA+  +  N+  FP++LIDGPYGAPAQDYK+Y+VVLLVGLGIGATPMISIVKDI+N
Sbjct:  545 TGFNAFWYSHHLFIIVYTLLIVHGEKLYITKDWYKRSTWMYLTVPLVLYAGERLLRAFRSSIKAVKILKVAVYPGNVLALHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDHLSVHIRTLGDWTRQLKTVFSEVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGPYGAPAQDYKQYEVVLLVGLGIGATPMISIVKDIVN 755          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 6.659e-96
Identity = 166/209 (79.43%), Postives = 184/209 (88.04%), Query Frame = 2
Query:   86 FNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAEREN--NSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            FNAFWY+HHLF+IVY LL+ HG  LYLT+ W+ KTTWMYL VP+VLYACERL RA RSSI+ V I KVAVYPGNVLA+H+S+PQ FKYKSGQYMFVNCAAVSPFEWHPFSITS+P DDYLSVHIR LGDWTR LK VFSEVC+P PAG SGLLRA+  +  N+  FPK+LIDGPYGAPAQDYKKY+VVLLVGLGIGATPMISIVKDI+N
Sbjct:  531 FNAFWYTHHLFVIVYILLVAHGYYLYLTRDWHNKTTWMYLVVPVVLYACERLIRAFRSSIKAVTIRKVAVYPGNVLAIHLSRPQNFKYKSGQYMFVNCAAVSPFEWHPFSITSAPQDDYLSVHIRVLGDWTRALKGVFSEVCKPPPAGVSGLLRADMLHGANNPDFPKVLIDGPYGAPAQDYKKYEVVLLVGLGIGATPMISIVKDIVN 739          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 2.142e-94
Identity = 159/211 (75.36%), Postives = 186/211 (88.15%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAE--RENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLF+IVY L I+HG  LYL+KKWY+KTTWMY+AVPM+LYACERL RA RS  + VKILKVAVYPGNV+A+HMSKPQGFKY SGQY+FVNC+ VS F+WHPF+I+S+PGDDYLS+HIRTLGDWT QLKT+FS+VC+P    +SGLLRA+  + +     PK+LIDGPYGAPAQDYKKYDVVLLVGLGIGATP+ISIVKD++N
Sbjct:  499 TGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKKTTWMYIAVPMILYACERLLRAFRSGYKAVKILKVAVYPGNVMAVHMSKPQGFKYTSGQYIFVNCSDVSSFQWHPFTISSAPGDDYLSMHIRTLGDWTSQLKTLFSKVCEPPTGDQSGLLRADVAKADYKPRLPKLLIDGPYGAPAQDYKKYDVVLLVGLGIGATPLISIVKDVLN 709          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 4.467e-92
Identity = 159/209 (76.08%), Postives = 187/209 (89.47%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAERENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLF+IVY+LLIVHGI+LYLTK+WY+KTTWMYLA+P++LY+ ERL RA RSS++ VKILKVA+Y GNVL L MSKPQGF YKSGQYMFVNCAAVSPFEWHPFSITS+PGD+YLSVHIR +GDWT +L+ VFSE   P+P G+SGL+ A+   +   +PK+LIDGPYGAPAQDYK+Y+V+LLVGLGIGATPMISIVKDI+N
Sbjct:  494 TGFNAFWYSHHLFVIVYSLLIVHGIELYLTKEWYKKTTWMYLAIPIILYSGERLLRAFRSSVKDVKILKVAMYTGNVLTLQMSKPQGFNYKSGQYMFVNCAAVSPFEWHPFSITSAPGDEYLSVHIRIVGDWTTKLRDVFSE---PSPTGRSGLV-ADYLQDKINYPKVLIDGPYGAPAQDYKEYEVLLLVGLGIGATPMISIVKDIVN 698          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHA_SOLTU (Respiratory burst oxidase homolog protein A OS=Solanum tuberosum GN=RBOHA PE=1 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.996e-88
Identity = 152/208 (73.08%), Postives = 173/208 (83.17%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAERENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDII 703
            TGFNAFWYSHHL IIVY +LI+HG  LYL   WY KTTWMYLAVP++LYA ER  R  RS +  V++LKVA+YPGNVL L MSKP  F+YKSGQYMFV C AVSPFEWHPFSITS+PGDDYLS+HIR LGDWT++LK VFSE C+   AGKSGLLRA+ EN     PK+LIDGPYGAPAQDY+KYDV+LLVGLGIGATP ISI+KD++
Sbjct:  575 TGFNAFWYSHHLLIIVYIVLIIHGTFLYLVHNWYSKTTWMYLAVPVLLYAGERTLRFFRSGLYTVRLLKVAIYPGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSIHIRQLGDWTQELKRVFSEACEQPEAGKSGLLRAD-ENTKTSLPKLLIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLL 781          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHF_ARATH (Respiratory burst oxidase homolog protein F OS=Arabidopsis thaliana GN=RBOHF PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.913e-88
Identity = 151/209 (72.25%), Postives = 174/209 (83.25%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAERENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLF+IVY LLI+HGI LY  K WY +TTWMYLAVP++LY  ER  R  RS    V++LKVA+YPGNVL L MSKP  F+YKSGQYMFV C AVSPFEWHPFSITS+P DDY+S+HIR LGDWT++LK VFSEVC+P   GKSGLLRA+ E   +  PK+LIDGPYGAPAQDY+KYDV+LLVGLGIGATP ISI+KD++N
Sbjct:  563 TGFNAFWYSHHLFVIVYILLILHGIFLYFAKPWYVRTTWMYLAVPVLLYGGERTLRYFRSGSYSVRLLKVAIYPGNVLTLQMSKPTQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPEDDYISIHIRQLGDWTQELKRVFSEVCEPPVGGKSGLLRAD-ETTKKSLPKLLIDGPYGAPAQDYRKYDVLLLVGLGIGATPFISILKDLLN 770          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 8.717e-88
Identity = 152/212 (71.70%), Postives = 181/212 (85.38%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLT-KKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAERE--NNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLF+IVY+LL+VHG  +YL  + WY+KTTWMYL VP+VLY CERL RA RSS+E V +LKVAV PGNVL+LH+S+P  F+YKSGQYM++NC+AVS  EWHPFSITS+PGDDYLSVHIR LGDWT+QL+++FSEVC+P P  +  L RA+ +  +    FP+ILIDGPYGAPAQDYKK++VVLLVGLGIGATPMISIV DIIN
Sbjct:  520 TGFNAFWYSHHLFVIVYSLLVVHGFYVYLIIEPWYKKTTWMYLMVPVVLYLCERLIRAFRSSVEAVSVLKVAVLPGNVLSLHLSRPSNFRYKSGQYMYLNCSAVSTLEWHPFSITSAPGDDYLSVHIRVLGDWTKQLRSLFSEVCKPRPPDEHRLNRADSKHWDYIPDFPRILIDGPYGAPAQDYKKFEVVLLVGLGIGATPMISIVSDIIN 731          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHB_ARATH (Respiratory burst oxidase homolog protein B OS=Arabidopsis thaliana GN=RBOHB PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.138e-87
Identity = 148/211 (70.14%), Postives = 181/211 (85.78%), Query Frame = 2
Query:   80 TGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSEVCQPAPAGKSGLLRAE--RENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            TGFNAFWYSHHLF+IVY LLIVHG  +YL+K+WY KTTWMYLAVP++LYA ERL RA R   + VK+LKVAVYPGNVL+L+MSKP+GFKY SGQY+++NC+ VSP +WHPFSITS+ GDDYLSVHIRTLGDWT QLK+++S+VCQ     +SGL  A+  + NN   FP++LIDGPYGAPAQDY+ YDV+LLVGLGIGATP+ISI++D++N
Sbjct:  475 TGFNAFWYSHHLFVIVYVLLIVHGYFVYLSKEWYHKTTWMYLAVPVLLYAFERLIRAFRPGAKAVKVLKVAVYPGNVLSLYMSKPKGFKYTSGQYIYINCSDVSPLQWHPFSITSASGDDYLSVHIRTLGDWTSQLKSLYSKVCQLPSTSQSGLFIADIGQANNITRFPRLLIDGPYGAPAQDYRNYDVLLLVGLGIGATPLISIIRDVLN 685          
BLAST of CX301580 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.457e-82
Identity = 150/221 (67.87%), Postives = 170/221 (76.92%), Query Frame = 2
Query:   86 FNAFWYSHHLFIIVYTLLIVHGIKLYLTKKWYQKTTWMYLAVPMVLYACERLTRALRSSIEPVKILKVAVYPGNVLALHMSKPQGFKYKSGQYMFVNCAAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKTVFSE--------------VCQPAPAGKSGLLRAERENNSRGFPKILIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIIN 706
            FNAFWY+HHLF+IVY LL++HG  +YL K+WY+KTTWMYLAVP+ LYA ERL RA RSSI  VK+LK+A YPG VL L MSKP  FKY SGQYMFVNC AVSPFEWHPFSITS+P DDYLSVHI+ LGDWT  ++ VFSE              V +P P G   +L      NS  FPKI+IDGPYGAPAQDYKKY+VVLL+GLGIGATPMISI+KDIIN
Sbjct:  484 FNAFWYTHHLFVIVYILLVLHGYYIYLNKEWYKKTTWMYLAVPVALYAYERLIRAFRSSIRTVKVLKMAAYPGKVLTLQMSKPTNFKYMSGQYMFVNCPAVSPFEWHPFSITSTPQDDYLSVHIKALGDWTEAIQGVFSESREKIVEKHHVIFQVSKPPPVG--DMLNGA---NSPRFPKIMIDGPYGAPAQDYKKYEVVLLIGLGIGATPMISIIKDIIN 699          
The following BLAST results are available for this feature:
BLAST of CX301580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
RBOHD_ARATH1.480e-10384.69Respiratory burst oxidase homolog protein D OS=Ara... [more]
RBOHC_SOLTU1.933e-10384.83Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHC_ARATH6.659e-9679.43Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHB_SOLTU2.142e-9475.36Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHD_SOLTU4.467e-9276.08Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHA_SOLTU2.996e-8873.08Respiratory burst oxidase homolog protein A OS=Sol... [more]
RBOHF_ARATH3.913e-8872.25Respiratory burst oxidase homolog protein F OS=Ara... [more]
RBOHA_ARATH8.717e-8871.70Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHB_ARATH1.138e-8770.14Respiratory burst oxidase homolog protein B OS=Ara... [more]
RBOHG_ARATH2.457e-8267.87Putative respiratory burst oxidase homolog protein... [more]

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Properties
Property NameValue
Genbank descriptionC08011C10SK PhyRootSw1 Citrus sinensis cDNA clone C08011C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301580 ID=CX301580; Name=CX301580; organism=Citrus sinensis; type=EST; length=714bp
AATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGGGCGCAACAAGC
TCAATCTGCCAAAACCACTTAAAAGACTCACTGGATTCAATGCCTTTTGG
TACTCACATCATCTTTTCATCATTGTCTATACCCTTCTCATTGTCCATGG
AATTAAACTCTATCTCACCAAGAAATGGTATCAGAAGACGACATGGATGT
ATCTGGCTGTCCCGATGGTTCTTTATGCTTGTGAGAGATTGACTAGAGCT
TTGAGATCAAGCATCGAGCCTGTCAAGATTCTCAAGGTTGCTGTTTATCC
TGGAAATGTCTTGGCATTACACATGTCAAAACCACAAGGCTTCAAATACA
AGAGCGGACAGTACATGTTCGTAAATTGCGCTGCCGTCTCACCGTTCGAA
TGGCATCCGTTTTCCATCACATCATCACCAGGAGATGACTACCTCAGCGT
TCATATCCGAACTTTGGGCGATTGGACTAGGCAGCTTAAGACAGTTTTCT
CTGAGGTTTGCCAGCCTGCACCTGCTGGGAAGAGCGGTCTTCTTAGAGCA
GAAAGGGAAAATAACTCTCGAGGGTTTCCAAAGATATTAATAGACGGACC
ATATGGAGCACCAGCTCAAGACTATAAAAAATATGATGTAGTGCTACTAG
TGGGGCTTGGAATTGGGGCTACTCCCATGATCAGCATAGTCAAAGACATC
ATCAACACATGAAA
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