CX301579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.152e-19 Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 2 Query: 14 AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 154 AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+ Sbjct: 46 AVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 2 Query: 14 AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 154 AVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES Sbjct: 46 AVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19 Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 2 Query: 14 AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 151 AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE Sbjct: 46 AVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19 Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 2 Query: 14 AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 154 +VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES Sbjct: 46 SVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.174e-18 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 2 Query: 17 VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 151 VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 47 VKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.354e-17 Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 2 Query: 17 VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS-TIRRLREQTE 151 VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS TIRRLREQ E Sbjct: 47 VKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.236e-14 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 17 VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 151 +KRKAVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 47 MKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_OSTTA (60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.690e-13 Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 17 VKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 151 +KR+AVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 47 MKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL37A_CRYST (60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 5.185e-12 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 2 Query: 11 EAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 154 +A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE ES Sbjct: 45 DAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
BLAST of CX301579 vs. ExPASy Swiss-Prot
Match: RL43_ASHGO (60S ribosomal protein L43 OS=Ashbya gossypii GN=RPL43 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.509e-11 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 2 Query: 11 EAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 154 +AVKR A GIW C C K AGGAYT +TA+A TVRSTIRRLRE E+ Sbjct: 45 KAVKRGAAGIWNCSSCKKTVAGGAYTFSTAAAATVRSTIRRLREMAEA 92 The following BLAST results are available for this feature:
BLAST of CX301579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301579 ID=CX301579; Name=CX301579; organism=Citrus sinensis; type=EST; length=388bpback to top |