CX301577

Overview
NameCX301577
Unique NameCX301577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
[Close]
BLAST of CX301577 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  556 QLKTKTKEVVADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 690
            +L+    EV ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV
Sbjct:   48 ELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRV 92
The following BLAST results are available for this feature:
BLAST of CX301577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
CALM_WHEAT7.958e-1484.44Calmodulin OS=Triticum aestivum PE=1 SV=3[more]
CALM_SPIOL7.958e-1484.44Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA7.958e-1484.44Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_LILLO7.958e-1484.44Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU7.958e-1484.44Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN7.958e-1484.44Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH7.958e-1484.44Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_CAPAN7.958e-1484.44Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3[more]
CALM_BRYDI7.958e-1484.44Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH7.958e-1484.44Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC08011C07SK PhyRootSw1 Citrus sinensis cDNA clone C08011C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301577 ID=CX301577; Name=CX301577; organism=Citrus sinensis; type=EST; length=691bp
AATTCGGCACGAGGGTTTTTTTTTTTTTTTTCGTTTTTTTTTTTTTTTTT
TTTTTTTCTCCATATGTCAGCATGTTTACATTACTGCAAAAACGTTTGGG
AATCCAAAAAAAAAAAAACGAGGGACTTTTTTCTAGAACTAAGCAAAACA
AAAAAATAGAGAAAAACAAAAGGCAAAACCAAGAAAAAAAAAAAAAGAAA
GAAAATGAAAATGCAAATGGGGGGAAAAGAAACCTTTTTGGCAGGGGGGG
GAAGAACAAATAAAAAAAGGGTAAGAAATCAATCCTGGTAAAACGAAGTC
CGATCATTACTCTTGATCTATAATTATTATCCGAGCAACTGAAAAAAGAA
ACCAAAATAAAGCGGGGGATGTTAAAAGATAAGTAGAATAATAATGGGAA
AACAAGGGCAAACCATCCCACAAGCAAATATAAGGTTTTTTTTATCATTG
GGAACTCTTCTTTCTTCTTTTTCGATCAGCCGCAAATACTAAGGGGGCAG
CTTTCTCTCAAGAAATAGATCAATAATCATAATAATACGCGTTCTTTACC
ACTGGCAACTTAAAACCAAAACCAAAGAAGTGGTTGCTGATGGTAATGGA
ACTATTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGA
TACCGACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTT
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