CX301575
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 4.858e-27 Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVLNINT+IYGLFHLFT+PN EDPLNH+AAAVLRDNPKLFE+NVRRAM GGYVGQTFF RCI Sbjct: 123 PVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFFPRCI 184
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.481e-25 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVLNINT+IYGLFHLFT+PNYEDPLNHEAAAVLRDNPK FE NVRRAM GG VGQT F RC+ Sbjct: 124 PVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTSFPRCM 185
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 121 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 121 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 121 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 121 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.046e-17 Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVL IN+IIYGL +LF +PN EDPLN EAA VL++N +LFE NV+R+M GGY+G T+F RC+ Sbjct: 121 PVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 182
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -2 Query: 285 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 470 PVLNIN+I+YGL LF +PN EDPLN EAA VL+ N + FE+NV++AM GG VG+T+F C+ Sbjct: 118 PVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKKAMRGGCVGETYFECCL 179
BLAST of CX301575 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = -2 Query: 297 PVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 470 PVLNI T+I+GL LF +PN +DPLN +AA ++ DN K FE+NVR+++ GGY+ F Sbjct: 169 PVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVRQSLRGGYISNRQF 226 The following BLAST results are available for this feature:
BLAST of CX301575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301575 ID=CX301575; Name=CX301575; organism=Citrus sinensis; type=EST; length=483bpback to top |