CX301560

Overview
NameCX301560
Unique NameCX301560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRT_ONCMY (Creatine kinase, testis isozyme OS=Oncorhynchus mykiss GN=tck1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.274e-48
Identity = 100/224 (44.64%), Postives = 137/224 (61.16%), Query Frame = 2
Query:   14 EKLDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            + L G+LKGKYY L  +++A+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HNDT+T L WVNEEDH R+ISM+ GG+++ VF RFC     ++   +  GT  MWNE LG++ TCPSNLGTGLRA V + +P  +K  +          E+V     LQ R             FD+SN  RLGFSEVELVQ ++DGV  ++  E+ L  G++  D+
Sbjct:  165 DSLSGDLKGKYYALKNMTDAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDGRGIWHNDTKTFLVWVNEEDHLRVISMQKGGNMKEVFNRFCTGLTKIETLFKDKGTSFMWNEHLGYVLTCPSNLGTGLRAGVHVKIPNISKHAK---------FEEVLKRLRLQKRGTGGVDTAAVGGTFDISNADRLGFSEVELVQMVVDGVKLLVEMEKKLEKGQSIDDL 378          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_MOUSE (Creatine kinase B-type OS=Mus musculus GN=Ckb PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 100/222 (45.05%), Postives = 131/222 (59.01%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLSGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHLGK---------HEKFSEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_RAT (Creatine kinase B-type OS=Rattus norvegicus GN=Ckb PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.630e-46
Identity = 100/222 (45.05%), Postives = 131/222 (59.01%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLSGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHLGK---------HEKFSEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQPIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_HUMAN (Creatine kinase B-type OS=Homo sapiens GN=CKB PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.630e-46
Identity = 101/222 (45.50%), Postives = 131/222 (59.01%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L WVNEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKDYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGK---------HEKFSEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_CHICK (Creatine kinase B-type OS=Gallus gallus GN=CKB PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 100/222 (45.05%), Postives = 132/222 (59.46%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            L G+LKGKYY L  +++A+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G++  D+
Sbjct:  165 LGGDLKGKYYALRNMTDAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGK---------HEKFGEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEKRLEKGQSIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_CANFA (Creatine kinase B-type OS=Canis familiaris GN=CKB PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 100/222 (45.05%), Postives = 131/222 (59.01%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHLGK---------HEKFPEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_BOVIN (Creatine kinase B-type OS=Bos taurus GN=CKB PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 100/222 (45.05%), Postives = 131/222 (59.01%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP   K          E   +V     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHLGK---------HEKFPEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRB_RABIT (Creatine kinase B-type OS=Oryctolagus cuniculus GN=CKB PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.056e-45
Identity = 100/222 (45.05%), Postives = 136/222 (61.26%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGKTPHDV 685
            LDG+L G+YY L  ++EA+ + L+D  FLF  P +  LL  +G AR WP+ RGI+HND +T L W+NEEDH R+ISM+ GG+++ VF RFC     ++   +S   + MWN  LG++ TCPSNLGTGLRA V I LP       G + +  E+L+++     LQ R             FDVSN  RLGFSEVELVQ ++DGV  +I  E+ L  G+   D+
Sbjct:  165 LDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSP-LLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCNGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPHL-----GQHEKFSEVLKRL----RLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEMEQRLEQGQAIDDL 376          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRU_MOUSE (Creatine kinase U-type, mitochondrial OS=Mus musculus GN=Ckmt1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43
Identity = 100/217 (46.08%), Postives = 133/217 (61.29%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGK 670
            L G+L G+YY L  ++EA+ + L+D  FLF  P +  LLT AG AR WP+ RGI+HN+ ++ L WVNEEDH R+ISME GG+++ VF RFC     ++   +  G + MWNE LG++ TCPSNLGTGLRA V I LP  +K     ++   ++LE +     LQ R             FD+SN  RLG SEVELVQ +IDGV  +I  E  L  G+
Sbjct:  199 LKGDLAGRYYRLSEMTEAEQQQLIDDHFLFDKPVSP-LLTAAGMARDWPDARGIWHNNEKSFLIWVNEEDHTRVISMEKGGNMKRVFERFCRGLKEVEKLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSK-----DNRFPKILENL----RLQKRGTGGVDTAATGSVFDISNLDRLGKSEVELVQLVIDGVNYLIDCERRLERGQ 405          
BLAST of CX301560 vs. ExPASy Swiss-Prot
Match: KCRS_CHICK (Creatine kinase S-type, mitochondrial OS=Gallus gallus GN=CKMT2 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.291e-43
Identity = 98/217 (45.16%), Postives = 132/217 (60.83%), Query Frame = 2
Query:   20 LDGELKGKYYELGGLSEADTKFLLDRGFLFQIPTARNLLTGAGAARSWPNNRGIFHNDTQTALAWVNEEDHCRIISMELGGDIRSVFARFCALSDALKAAAESNGTKLMWNETLGFMGTCPSNLGTGLRASVMICLPEFNKLMEGSNHEDKELLEQVCAAYDLQPRXXXXXXXXXXXXKFDVSNKQRLGFSEVELVQKMIDGVTKVIHYEELLASGK 670
            L G+L GKYY L  +SE D + L+D  FLF  P +  LLT AG AR WP+ RGI+HN+ +T L W+NEEDH R+ISME GG+++ VF RFC     ++   +  G + MWNE LG++ TCPSNLGTGLRA V + LP  +K     +    ++LE +     LQ R             +D+SN  R+G SEVELVQ +IDGV  ++  E+ L  G+
Sbjct:  199 LKGDLSGKYYSLTNMSERDQQQLIDDHFLFDKPVSP-LLTCAGMARDWPDARGIWHNNDKTFLVWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIKERGWEFMWNERLGYVLTCPSNLGTGLRAGVHVKLPRLSK-----DPRFPKILENL----RLQKRGTGGVDTAAVADVYDISNLDRMGRSEVELVQIVIDGVNYLVDCEKKLEKGQ 405          
The following BLAST results are available for this feature:
BLAST of CX301560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KCRT_ONCMY2.274e-4844.64Creatine kinase, testis isozyme OS=Oncorhynchus my... [more]
KCRB_MOUSE2.779e-4645.05Creatine kinase B-type OS=Mus musculus GN=Ckb PE=1... [more]
KCRB_RAT3.630e-4645.05Creatine kinase B-type OS=Rattus norvegicus GN=Ckb... [more]
KCRB_HUMAN3.630e-4645.50Creatine kinase B-type OS=Homo sapiens GN=CKB PE=1... [more]
KCRB_CHICK8.087e-4645.05Creatine kinase B-type OS=Gallus gallus GN=CKB PE=... [more]
KCRB_CANFA8.087e-4645.05Creatine kinase B-type OS=Canis familiaris GN=CKB ... [more]
KCRB_BOVIN8.087e-4645.05Creatine kinase B-type OS=Bos taurus GN=CKB PE=2 S... [more]
KCRB_RABIT1.056e-4545.05Creatine kinase B-type OS=Oryctolagus cuniculus GN... [more]
KCRU_MOUSE1.291e-4346.08Creatine kinase U-type, mitochondrial OS=Mus muscu... [more]
KCRS_CHICK1.291e-4345.16Creatine kinase S-type, mitochondrial OS=Gallus ga... [more]

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Properties
Property NameValue
Genbank descriptionC08011B02SK PhyRootSw1 Citrus sinensis cDNA clone C08011B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301560 ID=CX301560; Name=CX301560; organism=Citrus sinensis; type=EST; length=701bp
AATTCGGCACGAGGAGAAGCTTGACGGAGAGCTGAAAGGCAAGTACTACG
AGCTCGGAGGATTGTCGGAGGCCGACACGAAGTTTTTGTTGGACCGAGGC
TTCCTGTTCCAGATCCCAACAGCTCGCAACTTGTTGACGGGAGCCGGAGC
AGCGAGATCATGGCCAAACAATCGTGGTATCTTCCACAATGACACCCAGA
CAGCTTTAGCTTGGGTGAACGAGGAGGACCACTGCCGCATTATTTCTATG
GAACTTGGTGGAGATATCCGCTCCGTATTCGCTCGTTTCTGCGCGTTGTC
AGATGCGTTGAAGGCAGCAGCAGAGAGCAATGGCACGAAGTTGATGTGGA
ATGAGACCTTGGGTTTCATGGGAACATGTCCTTCGAACTTGGGTACGGGG
TTGAGAGCTTCGGTGATGATCTGCTTGCCAGAGTTCAACAAGCTGATGGA
AGGATCGAATCACGAGGACAAGGAGCTGTTAGAGCAAGTGTGTGCAGCAT
ATGACTTGCAGCCTCGTGGGTCAGCGGGCGAGCACTCCGCAGCAGAGGGA
GCTAAGTTTGATGTGTCAAACAAGCAACGATTAGGCTTCTCAGAAGTAGA
ATTGGTGCAGAAGATGATCGATGGAGTAACGAAGGTGATTCACTATGAGG
AGTTGCTAGCATCTGGCAAGACTCCTCATGACGTCAGAGAGTTGATCAAG
G
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