CX301557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_CRYNE (Pre-mRNA-splicing factor SYF1 OS=Cryptococcus neoformans GN=SYF1 PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.187e-71 Identity = 130/215 (60.47%), Postives = 164/215 (76.28%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFI 646 LEE+KYFE++F+VYERG+++F +P +IW YLSKFVKRYG KLERAR+LFE A+E P KPLYL YAKLEE++GLAKRAM +YD+A V + +K MY IYIA+A FG+P TR IYE+A+ES LPDK MC ++A +E+ LGEIDRAR IY ASQF DPR + EFW W++FE+ G+EDTFREMLRIKR+V AS+ ++T FI Sbjct: 730 LEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARDLFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAKATANFGLPATRPIYERALES-LPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPRIEPEFWQEWNDFEIETGSEDTFREMLRIKRAVQASFNTETSFI 943
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_USTMA (Pre-mRNA-splicing factor SYF1 OS=Ustilago maydis GN=SYF1 PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.347e-69 Identity = 125/209 (59.81%), Postives = 161/209 (77.03%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASYS 631 LE++KYFE++F+V+ERGV++F YP +IW YLSKFVKRYG KLERAR+LFE A++ PA KPL L Y +LEE++GL KRAMK+Y++AT+AV ++ MY YIA+AA FG+ TR IYE+AIES LPD+ MCL++A LE+ LGEIDRAR IY ASQF DPR+ T+FW W++FE+ G+EDTFREMLRIKRSV A ++ Sbjct: 777 LEDNKYFEESFKVFERGVELFSYPVAFEIWNVYLSKFVKRYGGAKLERARDLFEQALDKCPARFCKPLMLMYGQLEEEHGLVKRAMKIYERATRAVSTDDRFDMYVFYIAKAAATFGLAATRPIYERAIES-LPDRQTAEMCLRFAALERKLGEIDRARVIYAHASQFCDPRTQTDFWKEWNQFEIETGSEDTFREMLRIKRSVQAQFN 984
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_RAT (Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.001e-69 Identity = 127/220 (57.73%), Postives = 165/220 (75.00%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL 661 LEEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P K LYL YA+LEE++GLA+ AM VYD+AT+AV ++ M+ IYI RAAEI+GV TR IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W +FEV HGNEDT REMLRI+RSV A+Y +Q +F+ + L Sbjct: 528 LEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQML 746
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_MOUSE (Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.001e-69 Identity = 127/220 (57.73%), Postives = 165/220 (75.00%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL 661 LEEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P K LYL YA+LEE++GLA+ AM VYD+AT+AV ++ M+ IYI RAAEI+GV TR IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W +FEV HGNEDT REMLRI+RSV A+Y +Q +F+ + L Sbjct: 528 LEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQATYNTQVNFMASQML 746
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_HUMAN (Pre-mRNA-splicing factor SYF1 OS=Homo sapiens GN=XAB2 PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 2.540e-68 Identity = 125/220 (56.82%), Postives = 165/220 (75.00%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYL 661 LEEHKYFE++F+ YERG+ +FK+P+V DIW TYL+KF+ RYG KLERAR+LFE A++ P K LYL YA+LEE++GLA+ AM VY++AT+AV ++ M+ IYI RAAEI+GV TR IY++AIE L D+ + MCL++A++E LGEIDRAR IY F SQ DPR+ FW W +FEV HGNEDT +EMLRI+RSV A+Y +Q +F+ + L Sbjct: 528 LEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEV-LSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNFMASQML 746
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_DICDI (Pre-mRNA-splicing factor SYF1 OS=Dictyostelium discoideum GN=xab2 PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.257e-67 Identity = 119/208 (57.21%), Postives = 154/208 (74.04%), Query Frame = 2 Query: 5 LEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY 628 LEE+KYFED F+ YE GV++F +PHV+DIW+TYL+KF++RY KLER R+LFE + P YL YA EE YGLA+ +M VYD+A K+V ++ MY +YI RA+E FGV +TREI+ +AIE LPD+ V+ MCLK+A++EK GEIDRAR IY+ SQF+DPR+ +WN W +FE HGNEDTF+EMLRI+RSV ASY Sbjct: 541 LEENKYFEDMFKAYEHGVQLFLFPHVQDIWITYLTKFIQRYAGMKLERTRDLFEQVLSKVPPKESIIFYLMYANFEEQYGLARHSMAVYDRAAKSVDKEDRFKMYLLYIHRASEFFGVNQTREIFSKAIEQ-LPDQYVRDMCLKFADMEKKYGEIDRARSIYIHGSQFSDPRTSMFYWNTWSDFEKLHGNEDTFKEMLRIRRSVQASY 747
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_EMENI (Pre-mRNA-splicing factor syf1 OS=Emericella nidulans GN=syf1 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.378e-66 Identity = 122/227 (53.74%), Postives = 164/227 (72.25%), Query Frame = 2 Query: 2 LLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLMQKDQR 679 LLEEHKYFE++F+VYERG+ +F YP ++W YL+K V R K +ER R+LFE A++ P +PLYL Y LEE+ GLA+ AM++Y++AT+AV + ++ M+E YI ++A FG+P TR IYE+AI + LPD + K MCLK+AE+E+ LGEIDRAR IY ASQF DPR++ FW +W FEV HGNEDTF+EMLRIKRSV A Y + +FI + + + QR Sbjct: 553 LLEEHKYFEESFKVYERGLDLFTYPVAFELWNLYLTKAVDR--KIGIERLRDLFEQALDGCPPKFARPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYERAI-AALPDHEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQR 776
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_ASPFU (Pre-mRNA-splicing factor syf1 OS=Aspergillus fumigatus GN=syf1 PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.056e-66 Identity = 122/227 (53.74%), Postives = 164/227 (72.25%), Query Frame = 2 Query: 2 LLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLMQKDQR 679 LLEEHKYFED+F+VYERG+ +F YP ++W YL+K V R K +ER R+LFE A++ P KPLYL Y LEE+ GLA+ AM++Y++AT+AV + ++ M+E YI ++A FG+ TR IYE+AI + LPD++ K MCLK+A++E+ LGEIDRAR IY ASQF DPR++ FW +W FEV HGNEDTF+EMLRIKRSV A Y + +FI + + + QR Sbjct: 536 LLEEHKYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDR--KIGIERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYERAI-AALPDQEAKEMCLKFADMERRLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQR 759
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_NEUCR (Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa GN=syf-1 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65 Identity = 119/227 (52.42%), Postives = 163/227 (71.81%), Query Frame = 2 Query: 2 LLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLMQKDQR 679 LLEEHKYFE++F++YERG+ +F YP ++W YL+K V R K +ER R+LFE AVE P K +YL Y LEE+ GLA+ AM++Y++AT+AV + ++ M+ YI ++A FG+P TR IYE+AI + LPD + + MCLK+A++EK LGEIDRAR IY ASQF DPR++ FW +W +FEV HGNEDT++EMLRIKRSV A Y + +FI + L + Q+ Sbjct: 539 LLEEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDR--KISIERLRDLFEQAVEDCPPKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPSTRPIYERAI-AALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPGFWTKWDQFEVQHGNEDTYKEMLRIKRSVQAQYNTDVNFIASQALARSQQK 762
BLAST of CX301557 vs. ExPASy Swiss-Prot
Match: SYF1_MAGGR (Pre-mRNA-splicing factor SYF1 OS=Magnaporthe grisea GN=SYF1 PE=3 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 1.305e-64 Identity = 118/227 (51.98%), Postives = 163/227 (71.81%), Query Frame = 2 Query: 2 LLEEHKYFEDAFRVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKTKLERARELFENAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLGMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELEKSLGEIDRARGIYVFASQFADPRSDTEFWNRWHEFEVNHGNEDTFREMLRIKRSVSASY-SQTHFILPEYLMQKDQR 679 LLEEHKY+E++F++YERG+ +F YP ++W YL+K V R K +ER R+LFE AVE P K +YL Y LEE+ GLA+ AM++Y++AT+AV + ++ M+ YI ++A FG+P TR+IYE+AI + LPD + + MCLK+A++EK LGEIDRAR IY ASQF DPR+ FW +W +FEV HGNEDTF+EMLRIKR+V A Y + +FI + L + Q+ Sbjct: 542 LLEEHKYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDR--KISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRQIYERAI-AALPDDEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTTPAFWTKWEQFEVQHGNEDTFKEMLRIKRAVQAKYNTDVNFIASQALARSQQQ 765 The following BLAST results are available for this feature:
BLAST of CX301557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301557 ID=CX301557; Name=CX301557; organism=Citrus sinensis; type=EST; length=695bpback to top |