CX301551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1 SV=2) HSP 1 Score: 265.388 bits (677), Expect = 1.839e-70 Identity = 126/174 (72.41%), Postives = 152/174 (87.36%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 M++E KL NPMR +KV KL++N VGESGDRLTRA+KVLEQL+ + PV+SKARYTVRSFGIRRNEKIA +VTVRG KA ++L+ GLKVKEYEL ++NFS+TGCFGFGI EHIDLG+KYDP+TGI+GMDFYVVL RPGYRVARR+ R+G +HRVTKDDA+ WFQ KYEG+++ Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 174
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2) HSP 1 Score: 264.618 bits (675), Expect = 3.137e-70 Identity = 126/174 (72.41%), Postives = 152/174 (87.36%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 M++E KL NPMR +KV KL++N VGESGDRLTRA+KVLEQL+ + PV+SKARYTVRSFGIRRNEKIA +VTVRG KA ++L+ GLKVKEYEL ++NFS+TGCFGFGI EHIDLG+KYDP+TGI+GMDFYVVL RPGYRVARR+ R+G +HRVTKDDA+ WFQ KYEG+++ Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVIL 174
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.097e-70 Identity = 125/174 (71.84%), Postives = 152/174 (87.36%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 M++E KL NPMR++KV KL++N VGESGDRLTRAAKVLEQL+ + PV+SKARYTVRSFGIRRNEKIA +VTVRG KA ++L+ GLKVKEYEL ++NFS+TGCFGFGI EHIDLG+KYDP+TGI+GMDF+VVL RPGYRV RR+ R+G +HRVTKDDA+ WFQ KYEG+++ Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVIL 174
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_DROME (60S ribosomal protein L11 OS=Drosophila melanogaster GN=RpL11 PE=1 SV=2) HSP 1 Score: 260.766 bits (665), Expect = 4.530e-69 Identity = 124/170 (72.94%), Postives = 147/170 (86.47%), Query Frame = 2 Query: 41 DKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 D KNPMR L + KL +N CVGESGDRLTRAAKVLEQLT ++PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL+RGLKV+EYEL+++NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPGY V RK K G +G +HR+TK+DA+ WFQQKY+GI++ Sbjct: 11 DPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIIL 180
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.318e-68 Identity = 123/174 (70.69%), Postives = 150/174 (86.21%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 M++E K NPMR++KV KL++N VGESGDRLTRA+KVLEQL+ + PV+SKARYTVRSFGIRRNEKIA +VTVRG KA ++L+ GLKVKEYEL ++NFS TGCFGFGI EHIDLG+KYDP+TGI+GMDFYVVL R GYRVARR+ R+G +HRVTK+DA+ WFQ KYEG+++ Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 174
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.318e-68 Identity = 123/174 (70.69%), Postives = 150/174 (86.21%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 M++E K NPMR++KV KL++N VGESGDRLTRA+KVLEQL+ + PV+SKARYTVRSFGIRRNEKIA +VTVRG KA ++L+ GLKVKEYEL ++NFS TGCFGFGI EHIDLG+KYDP+TGI+GMDFYVVL R GYRVARR+ R+G +HRVTK+DA+ WFQ KYEG+++ Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVIL 174
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_NEUCR (60S ribosomal protein L11 OS=Neurospora crassa GN=rpl-11 PE=3 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 8.543e-68 Identity = 119/173 (68.79%), Postives = 146/173 (84.39%), Query Frame = 2 Query: 29 MSNEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIV 547 MS E K +NPMR+L++ KL++N CVGESGDRLTRAAKVLEQL+ + PVYSKARYTVR+FGIRRNEKI+VHVTVRG KA EIL+RGLKVKEYEL+K+NFS TG FGFGI+EHIDLG+KYDP GI+GMDFY + RPG RV+RR+ R+G HR+T+DD + WF+ +++ IV Sbjct: 1 MSTEQKAQNPMRELRIQKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPGIGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_ICTPU (60S ribosomal protein L11 OS=Ictalurus punctatus GN=rpl11 PE=2 SV=3) HSP 1 Score: 255.758 bits (652), Expect = 1.457e-67 Identity = 120/170 (70.59%), Postives = 148/170 (87.06%), Query Frame = 2 Query: 41 DKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 +K +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS++G FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K K GRIG KHR+ K +A+ WFQQKY+G+++ Sbjct: 6 EKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKREAMRWFQQKYDGVIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_RAT (60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 119/172 (69.19%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CX301551 vs. ExPASy Swiss-Prot
Match: RL11_MOUSE (60S ribosomal protein L11 OS=Mus musculus GN=Rpl11 PE=1 SV=4) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 119/172 (69.19%), Postives = 150/172 (87.21%), Query Frame = 2 Query: 35 NEDKLKNPMRQLKVDKLIINCCVGESGDRLTRAAKVLEQLTDKKPVYSKARYTVRSFGIRRNEKIAVHVTVRGFKANEILDRGLKVKEYELKKKNFSNTGCFGFGITEHIDLGLKYDPATGIFGMDFYVVLIRPGYRVARRKIKPGRIGNKHRVTKDDAIAWFQQKYEGIVM 550 ++ + +NPMR+L++ KL +N CVGESGDRLTRAAKVLEQLT + PV+SKARYTVRSFGIRRNEKIAVH TVRG KA EIL++GLKV+EYEL+K NFS+TG FGFGI EHIDLG+KYDP+ GI+G+DFYVVL RPG+ +A +K + G IG KHR++K++A+ WFQQKY+GI++ Sbjct: 4 DQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175 The following BLAST results are available for this feature:
BLAST of CX301551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301551 ID=CX301551; Name=CX301551; organism=Citrus sinensis; type=EST; length=651bpback to top |