EY716896

Overview
NameEY716896
Unique NameEY716896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_ARATH (NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana GN=ECR1 PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.454e-79
Identity = 135/189 (71.43%), Postives = 152/189 (80.42%), Query Frame = 1
Query:   13 WLFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHSGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGPGVLIELDTSVTLEKFINLLEEHPKLQLAKASVTYQGKNLYMQAPPVLE 579
            +LFPPQVKFPLCTLAETPR AAHCIEYAHLI+W+ VH GK+FDPD+PEHM+WVY EA++RAELFGIPGVTYSLTQGVVK                CALETLKI S CSKTL NYLTYNG  GL+ +VT+F +D +CLVCGPG+LIELDTSVTL KFI +LE+HPKL L+KASV      LYMQAPPVLE
Sbjct:  204 YLFPPQVKFPLCTLAETPRNAAHCIEYAHLIQWETVHRGKTFDPDEPEHMKWVYDEAIRRAELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLKIVSACSKTLVNYLTYNGGEGLYTEVTKFERDTECLVCGPGILIELDTSVTLSKFIEMLEDHPKLLLSKASVKQGENTLYMQAPPVLE 392          

HSP 2 Score: 33.4982 bits (75), Expect = 1.454e-79
Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 2
Query:  635 KDILHVTGGTG-QSE*KTSCLKKLRVVFRGVDGV 733
            KD +HV G    ++  K SC  K+RVVF+G DGV
Sbjct:  412 KDTIHVFGQRALKNNEKESCTTKVRVVFKGADGV 445          

HSP 3 Score: 23.483 bits (49), Expect = 1.454e-79
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 3
Query:  588 RSNLSLPLYDLMDKVAR 638
            R  LS PLYDLM +V +
Sbjct:  396 RPKLSKPLYDLMGRVQK 412          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_DROME (NEDD8-activating enzyme E1 catalytic subunit OS=Drosophila melanogaster GN=CG13343 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.093e-33
Identity = 78/197 (39.59%), Postives = 110/197 (55.84%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHS-GKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCG--PGVL-IELDTSVTLEKFINLLEEHPKLQLAKASVTY-----QGKNLYMQAPPVLE 579
            LFPPQV +PLCT+A TPR   HCIEY  +I+W++ +  G   D DDP+H+ W+Y  A++R+  F I GVTY L QGVVK                CALE  K+A+ C  +++NYL +N + G++    E  K ++CL C   P  L IE   + TLE  I LL + P+ QL   ++T      + + LYM     +E
Sbjct:  207 LFPPQVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPFGVPLDGDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGVKSIE 403          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_DICDI (NEDD8-activating enzyme E1 catalytic subunit OS=Dictyostelium discoideum GN=uba3 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.023e-31
Identity = 74/187 (39.57%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   19 FPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVHSGKSFDP-----DDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGPG-VLIELDTSVTLEKFINLLEEHPKLQLAKASVTYQGKNLYMQ 561
            FPPQV + +CT+A TPR   HCI++A L    +    K FDP     D+P+HM W++  A KRAE F I GVTY LTQGV K                C  E  K  +  S  L+NY+ YNG+ G++    E+   + C VCG   V  E+D S TL  F+  +    + Q  K S+   G+NLYMQ
Sbjct:  209 FPPQVSYAICTIANTPRVPEHCIQWALLFGLQDATLEKPFDPKQFDNDNPDHMNWLFECAKKRAEKFNINGVTYKLTQGVAKNIIPAIASTNAIIAAACCNEVFKFCTDSSGYLNNYMMYNGLNGVYTFTFEYEIKEGCAVCGTNLVTFEIDKSNTLSTFLEKITTDSRFQFKKPSLRSNGRNLYMQ 395          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_RAT (NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus GN=Uba3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30
Identity = 73/196 (37.24%), Postives = 106/196 (54.08%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGP-GVLIELDTSVTLEKFINLLEEHPKLQLAKASV--TYQGKN--LYMQAPPVLE 579
            L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++V+RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C  C      I+   S  L++ ++ L     LQ+   ++  T +GKN  LY+Q+   +E
Sbjct:  227 LYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGDGVPLDGDDPEHIQWIFQKSVERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIE 422          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_MOUSE (NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus GN=Uba3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.477e-30
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGP-GVLIELDTSVTLEKFINLLEEHPKLQLAKASV--TYQGKN--LYMQAPPVLE 579
            L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C  C      I+   S  L++ ++ L     LQ+   ++  T +GKN  LY+Q+   +E
Sbjct:  227 LYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGDGVPLDGDDPEHIQWIFQKSIERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQIKSPAITATLEGKNRTLYLQSVTSIE 422          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_PONAB (NEDD8-activating enzyme E1 catalytic subunit OS=Pongo abelii GN=UBA3 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.929e-30
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGP-GVLIELDTSVTLEKFINLLEEHPKLQLAKASV--TYQGKN--LYMQAPPVLE 579
            L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C  C      I+   S  L++ ++ L     LQ+   ++  T +GKN  LY+Q+   +E
Sbjct:  227 LYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVVAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDFLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIE 422          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_HUMAN (NEDD8-activating enzyme E1 catalytic subunit OS=Homo sapiens GN=UBA3 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.519e-30
Identity = 72/196 (36.73%), Postives = 106/196 (54.08%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGP-GVLIELDTSVTLEKFINLLEEHPKLQLAKASV--TYQGKN--LYMQAPPVLE 579
            L+PPQV FP+CT+A  PR   HCIEY  +++W +      G   D DDPEH+QW++ ++++RA  + I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C  C      I+   S  L++ ++ L     LQ+   ++  T +GKN  LY+Q+   +E
Sbjct:  227 LYPPQVNFPMCTIASMPRLPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIE 422          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_DANRE (NEDD8-activating enzyme E1 catalytic subunit OS=Danio rerio GN=uba3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.297e-30
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH---SGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGPGVL-IELDTSVTLEKFINLLEEHPKLQLAKASV--TYQGKN--LYMQAPPVLE 579
            L+PPQ+ FP+CT+A  PR   HC+EY  ++ W +      G   D DDP+H+QWVY ++++RA  F I GVTY LTQGVVK                CA E  KIA+     L+NYL +N V GL+    E  + ++C  C      ++   S  L++ ++ L E+  LQ+   ++  T  GKN  LY+Q    +E
Sbjct:  226 LYPPQINFPMCTIASMPRLPEHCVEYVRMLLWPKEKPFGDGVVLDGDDPKHIQWVYQKSLERAAEFNITGVTYRLTQGVVKRIIPAVASTNAVIAAACATEVFKIATSAYVPLNNYLVFNDVDGLYTYTFEAERKENCSACSQVPQDMQFTPSAKLQEVLDYLTENASLQMKSPAITTTLDGKNKTLYLQTVASIE 421          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_CAEEL (NEDD8-activating enzyme E1 catalytic subunit OS=Caenorhabditis elegans GN=uba-3 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.612e-30
Identity = 73/173 (42.20%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDE--VHSGKSFDPDDPEHMQWVYSEAVKRAELFGIPGVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGPGVL-IELDTSVTLEKFINLLEE-----HPKL 510
            L+PPQV FPLCT+A TPR   HCIEY  ++ W E     G S D DDP H++WV   A  RAE + I GV   LT GV+K                CALE LK+A+  +K + NYL +  + G +  V   +KD +CL C  G L  E+  S TLE  I  L E     HP L
Sbjct:  201 LYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPEEKPFEGVSLDADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLNFTQIHGAYTSVVSMMKDDNCLTCSGGRLPFEVSPSSTLESLIIRLSERFHLKHPTL 373          
BLAST of EY716896 vs. ExPASy Swiss-Prot
Match: UBA3_SCHPO (NEDD8-activating enzyme E1 catalytic subunit OS=Schizosaccharomyces pombe GN=uba3 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.646e-21
Identity = 64/214 (29.91%), Postives = 97/214 (45.33%), Query Frame = 1
Query:   16 LFPPQVKFPLCTLAETPRTAAHCIEYAHLIKWDEVH-------------------SGKSFDPDDPEHMQWVYSEAVKRAELFGIP--GVTYSLTQGVVKXXXXXXXXXXXXXXXXCALETLKIASGCSKTLSNYLTYNGVAGLHIKVTEFVKDKDCLVCGPGVLIEL-----DTSVTLEKFINLLEEHPKLQLAKASVTYQGKNLYMQAPPVLE 579
            +  P++ +P+CTLA TPR   HC+E+A+L++W  V                       +F+PD+  H+ W+   +++RA  F IP   +     QG+VK                C  E LKI +  +  L NY+ Y G  G +       K  DC VC  GVL E+      ++VTL+  +N   +   LQ    S T  G  LY+ +PP L+
Sbjct:  195 MLTPKISYPICTLANTPRLPEHCVEWAYLLEWPRVFLNASVDSFSKQEVFEPLDGKNSNFEPDNIRHIDWLVKRSIERANKFQIPSSSINRFFVQGIVKRIIPAVASTNAIIAASCCNEALKILTESNPFLDNYMMYVGEDGAYTYTFNLEKRSDCPVC--GVLSEVYDISASSTVTLKDILNHYSKSYNLQNPSVS-TAAGTPLYLASPPALQ 405          
The following BLAST results are available for this feature:
BLAST of EY716896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
UBA3_ARATH1.454e-7971.43NEDD8-activating enzyme E1 catalytic subunit OS=Ar... [more]
UBA3_DROME1.093e-3339.59NEDD8-activating enzyme E1 catalytic subunit OS=Dr... [more]
UBA3_DICDI1.023e-3139.57NEDD8-activating enzyme E1 catalytic subunit OS=Di... [more]
UBA3_RAT1.131e-3037.24NEDD8-activating enzyme E1 catalytic subunit OS=Ra... [more]
UBA3_MOUSE1.477e-3036.73NEDD8-activating enzyme E1 catalytic subunit OS=Mu... [more]
UBA3_PONAB1.929e-3036.73NEDD8-activating enzyme E1 catalytic subunit OS=Po... [more]
UBA3_HUMAN2.519e-3036.73NEDD8-activating enzyme E1 catalytic subunit OS=Ho... [more]
UBA3_DANRE4.297e-3036.73NEDD8-activating enzyme E1 catalytic subunit OS=Da... [more]
UBA3_CAEEL5.612e-3042.20NEDD8-activating enzyme E1 catalytic subunit OS=Ca... [more]
UBA3_SCHPO3.646e-2129.91NEDD8-activating enzyme E1 catalytic subunit OS=Sc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-072-G04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY716896 ID=EY716896; Name=EY716896; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGCTGGCTTTTCCCCCCTCAAGTGAAGTTTCCTTTATGCAC
TCTTGCGGAAACCCCTAGAACAGCTGCTCATTGTATTGAATATGCCCATT
TAATCAAGTGGGATGAGGTGCACAGTGGAAAGTCTTTTGATCCAGATGAC
CCGGAACATATGCAGTGGGTCTATTCCGAGGCCGTCAAGAGAGCTGAGCT
TTTTGGCATTCCTGGAGTTACATATTCTCTGACTCAGGGTGTTGTGAAAA
ACATCATACCAGCTATTGCTTCCACCAATGCAATTATATCAGCAGCATGT
GCTCTTGAAACATTGAAGATTGCATCAGGATGCAGCAAAACTCTATCGAA
TTATCTAACTTATAATGGTGTTGCAGGTCTACACATAAAAGTTACTGAAT
TCGTGAAGGACAAGGACTGTCTTGTATGTGGTCCAGGTGTTCTTATTGAA
TTGGACACTTCAGTTACTCTAGAAAAGTTCATTAATCTACTTGAAGAGCA
TCCTAAGCTGCAGTTAGCAAAAGCAAGTGTCACATACCAAGGGAAGAATC
TGTACATGCAGGCTCCTCCAGTTCTGGAAAGATGACCCGATCAAACCTAA
GCCTACCACTTTATGACCTTATGGATAAAGTTGCAAGGATATACTTCATG
TCACTGGTGGAACAGGGCAAAGTGAATAGAAAACCTCGTGCCTGAAGAAA
TTGCGTGTTGTATTCAGGGGAGTTGATGGGGTTCAAATATGAATTTGCTG
GGGGGGCCTATTTTACCCCCTGCCCCATGTTTTATTGAACCAGCCCTCTT
CCAACCTCCAATGGATGCTGGGCCTGGCAAGTATCTTTAATGGAACCTAG
GAATTAACGGGCCAAGTTGGGTACATTGGAATTGGGAAAATTTTAATTCC
CCTCCGTGCC
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