DY257434

Overview
NameDY257434
Unique NameDY257434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1209
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6605 contig Csv1_Contig6605:1..1209. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY257434 vs. ExPASy Swiss-Prot
Match: SYFB_ARATH (Probable phenylalanyl-tRNA synthetase beta chain OS=Arabidopsis thaliana GN=At1g72550 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.276e-16
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 3 
Query:  564 QGPFTYEALPPSHINFVLLRQTRDFKDD*LMDLYESDVNLKKNLNIIETSPPYPV**DQKRVVLGFPALWRG 779
            QGPFTYEALPP+ INFV L+QT+ F+ D L++ Y+SD+ LKK L+IIE SP +PV  D KR VL  P +  G
Sbjct:  169 QGPFTYEALPPTDINFVPLKQTKSFRADELIEFYKSDMKLKKFLHIIENSPVFPVLYDSKRTVLSLPPIING 240
The following BLAST results are available for this feature:
BLAST of DY257434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SYFB_ARATH5.276e-1658.33Probable phenylalanyl-tRNA synthetase beta chain O... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2CB06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257434 ID=DY257434; Name=DY257434; organism=Citrus sinensis; type=EST; length=1209bp
AAATCCCAAAGATGAGAGCCTCAAAATTCAGCGCTTTCTCACTCTTACTA
GCAGCGATAATCCTCGCCGTCCACGTGGCGTCCTCGTCATCTTCGGGCGT
TGATTTCGATGGTCTCGGCCACCAGCTGGGCTTCGTTCCGGGGAAATCGG
AGTGCCGCGGGTCGATCGCCGAGTGTATGTCCGTCGAGGGCGACGACGGC
GACCAGGAGTTGGATTTGGAGTTCGCGATGGAGGGTGAGATCAACCGGCG
CATTTTAGCGATGAGGAGGTACATCAGCTACGGTGCGCTGAGGAGGAACA
GTGTGCCATGCTCGCGGCGCGGCGCGTCGTATTACAATTGCCGAGCTGGC
GGTCAGGCAAGTCCTTACTCTCGCGGGTGCAGTGCTGTTAGCCGTTGCAG
GCGTTGAATTCTCTCTTGAATTTGTTATTTGATTTTTCAATTTAAATATT
TTTAGTTTATATTGCAGAAATTATTATTTGCAAGGTTGTTTTTACGTAAT
TACGTATAAAGAAGGGAAGATAGGGATTGGGTGGTTGTTGCGGGAATAGA
AGTGAATTGATGTCAAGGCCCTTTCACGTATGAGGCTTTGCCACCATCAC
ATATAAATTTTGTGCTTCTGAGGCAGACAAGGGACTTTAAAGACGATTAG
CTTATGGATTTGTACGAATCAGATGTGAACCTGAAAAAGAATTTGAACAT
AATTGAGACTTCCCCTCCGTACCCTGTCTAATGAGATCAAAAAAGGGTTG
TTCTGGGTTTTCCGGCATTATGGCGGGGGCCCATCTGCCTTACGGTAAAT
AGAAGAAAGTAGAAATTGATTGTACTGGCAAGAATTGACAAAGGCCAAAA
GGTTTGAATTTAATGGTATCAGTTTTTTCGAAAATTTGTTTAAAAAAACC
CGTTTGAACAGGTAGAAGGAACCTACGCGAGGGGAGGCCAAGGAGGAACC
GAGCCGGGCACGCTCCAAAAAGGAATTTCCTTCACATAAAATAAACCAAA
AATTTTACCCCCCTTGAAAGGGAAAAGAGTGTAAAAAAATATGGAAAGGG
AAGGGAATTGGGGGGGGGGGGGAAGGGGAAAAGGGGGAAAATTTTTGTTC
AATAAATTGGTTTTGGTGCCCCCCCCAAAAAAGCGGGGTGTTCCGCACCC
CCCGCGGGAAATTAAAAAGGGAGGGGGTGGTTTTTTTTTTGGTGGGGTTG
TGGCGGGGG
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