EY716892

Overview
NameEY716892
Unique NameEY716892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY716892 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.389e-21
Identity = 29/50 (58.00%), Postives = 31/50 (62.00%), Query Frame = 1 
Query:  118 MWNXXXXXXXXXXXXXXFSTAIPGPCMVHKRGTDILHDPWFNKDTGFPLT 267
            MW                STAI  PC+VHKRG DILHDPWFNKDTGFP+T
Sbjct:    1 MWRVARSAASTFRRTRRLSTAISAPCIVHKRGADILHDPWFNKDTGFPMT 50

HSP 2 Score: 56.225 bits (134), Expect = 2.389e-21
Identity = 30/43 (69.77%), Postives = 33/43 (76.74%), Query Frame = 2 
Query:  284 GSVGLLPPRVIIF*HQYVRFVESFR*FQKNTEGQLNIVVSLAK 412
            G  GLLPPRVI F  QY RF+ESFR  +KNTEGQ + VVSLAK
Sbjct:   56 GLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAK 98
The following BLAST results are available for this feature:
BLAST of EY716892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MAON_SOLTU2.389e-2158.00NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-072-F12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY716892 ID=EY716892; Name=EY716892; organism=Citrus sinensis; type=EST; length=795bp
CCACGCGTCCGCAAAATCTAAAACGATGCAATTAAAGTGGACTTTATAGT
TTGTGTTATTGTTTTAGATCTTTTCCGGAAAGCCTTTTTGTTCTTTGGCT
TAGATCTTGACGCGGAAATGTGGAATCTTGCTCGAGTTGCCGCGTCCGTA
TTAAGCCGATCTAGGCGATTCTCGACGGCGATTCCTGGTCCCTGTATGGT
TCACAAACGCGGCACTGATATTCTTCATGATCCCTGGTTCAACAAGGATA
CTGGCTTTCCTTTGACTGATAGAGACCGACTGGGGCTCCGTGGGCCTCCT
CCCACCCCGCGTGATTATCTTCTAGCATCAATATGTTCGTTTCGTGGAAT
CATTCCGATAATTTCAGAAAAATACTGAGGGTCAACTAAATATTGTTGTA
TCATTAGCAAAAGTGGAGGATAGTGCTTATCCTGCCTGTTTTGTCTTCCA
TCTTACACTACCTATTCCCGCGTGCCTACCTCCTCCATCTTCGCTCATTT
TTGTAACCTCCCCCTGTTGGCAGTGGCGCGTCGGACTGCTAACAGATCTG
GTAGAGAAGACCAGGCACAAAATTTCAACCGACACTAAACACAACCCCAA
AAAACCACAACCATCCAACGCTCTTCCGGCGACAGAGGAGACACACGCGC
CACAAACCACATAGACCACACTAACGGCCCAACCATTTTATCATCTCTAG
ACGCGCTGGCGCCCACGTCCCGGCCCGGCCCTTGGGGTTTGGCCAACACA
GAGGAAGCGGCGCGGGGTCGCAGGCCTCCGCGGCAGTCTGCTGCC
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