DY257404

Overview
NameDY257404
Unique NameDY257404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1319
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6597 contig Csv1_Contig6597:1..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BPE_ARATH (Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.327e-18
Identity = 71/165 (43.03%), Postives = 87/165 (52.73%), Query Frame = 2
Query:  278 NGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQNSQPPEPPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNKGHRESIGPWKR*ITTSHRHSGQVGFLAMKLEILHKRKEPWALRYFPPKE 772
            +G  KRR+ E +SAK VST   +       + + KR K     D+    KAEAE    +  EQ  Q  EP K DYIHVRARRGQATDSHSL            MKILQ+LVPG NK   +++      I        QV FL+MKLE ++ R  P  +  FPPKE
Sbjct:   72 SGAWKRREDESKSAKIVSTIGAS-------EGENKRQKI----DEVCDGKAEAESLGTE-TEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL-VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNP-GIEVFPPKE 221          
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.193e-16
Identity = 74/184 (40.22%), Postives = 97/184 (52.72%), Query Frame = 2
Query:  206 SQFGTNGEVSGEEPGNGEHKMDHGNGVRKRRDV--EDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHS--KAEAEPSS----VKPAEQNSQPPEPPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNK--GHRESIGPWKR*ITTSHRHSGQVGFLAMKLEILH 727
            S+   N +VS  E       +  G G RK RD+  ED+S+K VS+SS   +GN + +S  K+ K  GS   N     + E E SS     K  EQ ++P EPPK DYIHVRARRGQATD HSL            M  LQ+++PG NK  G    +      I +  R   QV FL+MKLE+++
Sbjct:   50 SEHSGNKDVSAAEESTVTD-LTAGWGSRKTRDLNSEDDSSKMVSSSS---SGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKP-EPPK-DYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQR---QVEFLSMKLEVVN 224          
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.244e-14
Identity = 57/155 (36.77%), Postives = 80/155 (51.61%), Query Frame = 2
Query:  275 GNGVRKRRDVEDESAKH--VSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAE------QNSQPPEPPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNKGHRESIGPWKR*ITTSHRHSGQVGFLAMKL 715
            G   RKR+ V    +K   +ST+S + + ++  + +G +  +  S +     + E E    +  E       N++PPEPPK DYIHVRARRGQATDSHSL            MK+LQ+LVPG NK   +++      I        QV FL+MKL
Sbjct:  216 GEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKAL-MLDEIINYVQSLQRQVEFLSMKL 368          
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BH077_ARATH (Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.365e-12
Identity = 62/193 (32.12%), Postives = 88/193 (45.60%), Query Frame = 2
Query:  209 QFGTNGEVSGE---EPGNGEHKMDHGNGVRKRRDVEDESAKHVSTSSGNGN----GNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPAEQ---------NSQPPEPPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNKGHRESIGPWKR*ITTSHRHSGQVGFLAMKLEILHKRKE 739
            QFG++ E   +   +  N    +D  +   +    +  S K  S  SGNG      + +  S+ K    +G       SK +   SS    E+         +++PPE PK DYIHVRARRGQATDSHSL            M +LQ+LVPG N+   +++      I        QV FL+MKL  ++ R E
Sbjct:   76 QFGSDREFGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPK-DYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAV-MLDEIINYVQSLQRQVEFLSMKLATVNPRME 266          
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.783e-12
Identity = 60/203 (29.56%), Postives = 88/203 (43.35%), Query Frame = 2
Query:  164 VGRGRKELTLGSDLSQFGTNGEVSGEEPGNGEHKMDH----GNGVRKRRDVEDESAKHVSTSSGNGNGNRVNDSDGKRIKTSGSRDDNHHSKAEAEPSSVKPA-------EQNSQPPEPPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNKGHRESIGPWKR*ITTSHRHSGQVGFLAMKLEILHKRKE 739
            VG    ++++    S   ++ +     PG+G    D     GNG + R     E++ +      NG  N       +  ++    D+N   K   E S   P        +Q  Q  +PPK  YIHVRARRGQAT+SHSL            MK LQ+LVPG NK   +++      I        QV FL+MKL  ++ + +
Sbjct:  182 VGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGR-----ETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAV-MLDEIINYVQSLQRQVEFLSMKLATVNPQMD 378          
BLAST of DY257404 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.775e-12
Identity = 51/142 (35.92%), Postives = 69/142 (48.59%), Query Frame = 2
Query:  317 AKHVSTSSGNGNGNRVNDSDGKRIKTSG-SRDDNHHSKAEAEPSSVKPAEQNSQPPEP--PKPDYIHVRARRGQATDSHSLXXXXXXXXXXXXMKILQELVPGWNKGHRESIGPWKR*ITTSHRHSGQVGFLAMKLEILHKR 733
            A HV     +G  +R   +  K+   S  S       K +++P   K +E+N    +   P  DYIHVRARRGQATDSHSL            MK+LQ+LVPG NK   +++      I        QV FL+MKL  ++ R
Sbjct:  191 ASHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL-MLDEIINYVQSLQRQVEFLSMKLSSVNTR 331          
The following BLAST results are available for this feature:
BLAST of DY257404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BPE_ARATH6.327e-1843.03Transcription factor BPE OS=Arabidopsis thaliana G... [more]
BH079_ARATH1.193e-1640.22Transcription factor bHLH79 OS=Arabidopsis thalian... [more]
BH078_ARATH4.244e-1436.77Transcription factor bHLH78 OS=Arabidopsis thalian... [more]
BH077_ARATH1.365e-1232.12Transcription factor bHLH77 OS=Arabidopsis thalian... [more]
BH049_ARATH1.783e-1229.56Transcription factor bHLH49 OS=Arabidopsis thalian... [more]
BH062_ARATH6.775e-1235.92Transcription factor bHLH62 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2BF09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257404 ID=DY257404; Name=DY257404; organism=Citrus sinensis; type=EST; length=1319bp
TTTGTGATTTCCTTTAATTATTAGAAAAAAAAAACATTGGGGGCCCCAGT
TATGCTTTATTTTTTCCTGTTAGGGTGGGGTAAATATGTTCAGATATGCT
TCCTGTTGTCATGTAGCTGGCACGTTAAGGGTCGCGGAAAAGTACAGAAG
AGGGACTCAGGCGGTGGGAAGGGGCAGAAAGGAGCTCACTTTGGGCAGCG
ATTTGAGTCAGTTTGGGACTAATGGAGAGGTTTCTGGTGAGGAGCCAGGG
AACGGGGAGCATAAGATGGACCATGGGAATGGAGTAAGGAAGCGGCGTGA
TGTGGAGGATGAGTCAGCCAAGCATGTATCTACAAGCAGTGGCAACGGCA
ACGGCAATCGAGTGAATGATTCTGATGGAAAACGGATTAAAACATCTGGA
AGTAGAGATGACAATCACCATTCCAAAGCTGAAGCAGAGCCCAGTTCGGT
CAAGCCTGCTGAACAAAATAGTCAACCACCGGAGCCTCCTAAACCGGATT
ACATCCATGTACGAGCAAGAAGGGGCCAAGCTACTGATAGCCACAGTTTA
GCAGAAAGAGCTAGGAGAGAAAAGAAAAGCGAAAGGATGAAAATTCTCCA
GGAATTGGTTCCTGGATGGAACAAAGGTCATCGCGAAAGCATTGGTCCCT
GGAAAAGATAAATAACTACATCCCATCGACACAGCGGGCAGGTTGGATTC
CTGGCAATGAAACTTGAAATCCTCCATAAAAGAAAGGAACCCTGGGCATT
GAGGTATTTCCCCCCTAAAGAATTTAACCAACAAACATTTGAAACTGGGG
GGTATGGCATTTGGGTCTCAAAGCTACAAAAAAAAACAGCCGGGGGAACA
TCCCCCCAACGGGGTCGCAATGGCAGATGGGGGGGGGGGTTTGAAAAAAA
GGACCTAAACAAACAGAGAAAAACTTCCCGGGCCATTAAAAAAACAATAT
AAGGGATACACGGGGCGAATGGCCTCCCCCTCCAAGGGTCACAAAATCCA
CATCGGTGGAAAAGAAACAAAGTCCCACATTTACACAAAACAAGCACGGG
CCGGAGTGAAAACGAAGGTCGGAAAAGCCCTCTGGTCCCCGGGGAGGGAA
AAACGATATACCCCTACACCCCATTTTGTTTACTATAAAAGGCCGCCCCA
CCAGTGAACCAAAACAAGAGAAAAAACAAAAAACGAGGGAAAAAATCATC
ACGAACTATAGAGACGACCGAGGTGCCCCTCGGCCAGAAAGAAATGAGGA
GTTCTGACTTAACGTACCAGGAATTATAACTCTCCCCTTAGATTAGGAAC
TAAAATATAACACAACCTC
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