CN191471

Overview
NameCN191471
Unique NameCN191471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191471 vs. ExPASy Swiss-Prot
Match: Y3136_ARATH (Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana GN=At3g21360 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.350e-57
Identity = 100/139 (71.94%), Postives = 118/139 (84.89%), Query Frame = -3 
Query:  147 GRGWKSIFLTEDKSLAEERAANLGLKLEWMEDGGVKTVLGPIPAVTYDKIRQRKIWFNSIVMAYTCWKDTQNDPVKAVTFGNGSPLPEDIVYDCMKILEEECVAIPWQNGDVLLIDNLAVLHARRSSSRPRHILASLCK 563
            GRGWKS FLT DK+LAE+RA +LG+KLEW EDGG KTV+GPIPA+ YD+ R RK+WFNS+V AYT W+D +NDP KAVTFG+G PLP DIV+DC++ILEEECVA+PWQ GDVLLIDN AVLH+RR    PR +LASLCK
Sbjct:  192 GRGWKSTFLTHDKNLAEQRAVDLGMKLEWTEDGGAKTVMGPIPAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEECVAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVLASLCK 330
The following BLAST results are available for this feature:
BLAST of CN191471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3136_ARATH1.350e-5771.94Clavaminate synthase-like protein At3g21360 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005E02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191471 ID=CN191471; Name=CN191471; organism=Citrus sinensis; type=EST; length=568bp
TTTTAACACAAACGCATCAACCCAAATCAGGGAAGGTGGAGTCCAAAGTG
AAATCAAGAATGCAGGCATACCAGTAGCATGAAATTAAATTCACAAGAAT
AGTGTATAAAAAAAAAAAAATTCACAAGAATAGAGTTTATTTTCTACTTG
CAAAGAGAAGCCAATATATGGCGAGGACGACTGGATGATCTACGGGCATG
AAGCACAGCCAAGTTATCTATCAGCAGAACGTCACCATTCTGCCAAGGGA
TGGCAACACATTCCTCTTCAAGGATTTTCATACAGTCATAGACGATATCC
TCTGGCAATGGACTACCATTCCCAAAAGTGACTGCCTTAACAGGATCATT
TTGTGTGTCTTTCCAGCATGTATAAGCCATTACTATGCTATTGAACCAAA
TCTTCCGTTGCCTGATTTTATCATACGTAACAGCTGGGATTGGACCCAAC
ACTGTCTTCACTCCACCGTCTTCCATCCACTCCAATTTCAAGCCCAAATT
AGCAGCCCTTTCCTCGGCGAGGCTCTTGTCTTCAGTCAAGAAAATGGATT
TCCAGCCGCGGCCAGTCG
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