DY257397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL2J_ARATH (RING-H2 finger protein ATL2J OS=Arabidopsis thaliana GN=ATL2J PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21 Identity = 59/175 (33.71%), Postives = 79/175 (45.14%), Query Frame = 1 Query: 130 EFILALLAVITIPALVYAFFFAVKCPPWPXXXXXXXXXXXXXXXXXXX-ENGVVSKANEGTEMASGLKYRKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICRXXXXXXXXXXXXXXXXR-----------------GRDDDLHQGLPDSASLV 600 + I ++A + +PALVYA FF C + +++ +E SG K+ K+ H K++G EC VCL F D + +RQLS CKH+FH CI+ WLK H NCPICR RDDD QGLPD++SLV Sbjct: 63 KLIFVVIAFVAVPALVYALFFNGPCSSSRRNSSSSRTSSSSDDTPHATVDTPPITETTVTSE--SGGKFHKDTHSKEIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVSVKQQTEAPNVPVNVNGNVNRSGGNRRVSATSRDDDWRQGLPDASSLV 235
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL5A_ARATH (RING-H2 finger protein ATL5A OS=Arabidopsis thaliana GN=ATL5A PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14 Identity = 42/84 (50.00%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 280 GVVSKANEGTEM-ASGLKYRK----------EAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G+ S A GT +GLK R+ VK TEC +CL FADGE VR L C HSFH SCID WL SHS+CP CR Sbjct: 64 GLSSSAAAGTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: EL5_ORYSJ (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica GN=EL5.1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12 Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 334 RKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 ++E D G EC VCL+ DGE R L C H FHA C+DMWL SHS CP+CR Sbjct: 122 KEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 28/46 (60.87%), Postives = 34/46 (73.91%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G++C VCLS F + E +R L C H+FH CID WLKSHSNCP+CR Sbjct: 139 GSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL2H_ARATH (RING-H2 finger protein ATL2H OS=Arabidopsis thaliana GN=ATL2H PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 352 KDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 K+ GTEC +CLS F+D + VR ++ C+H FH++CID+W + H CP+CR Sbjct: 97 KNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCR 145
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 364 TECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 T+CPVCL+ F + E +R L C H+FH SCID WL SH+NCP+CR Sbjct: 175 TDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12 Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 328 KYRKEAHVKDVGTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 KYRK + ++C VCLS F + E +R L C H+FH CID WLKSHSNCP+CR Sbjct: 146 KYRKMDGFVE-SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 GT+C +CL F + E +R L C H+FH CID WLKSHSNCP+CR Sbjct: 178 GTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCR 223
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 GTEC VCL+ F + E +R L C H+FH +CID WL SH NCP+CR Sbjct: 132 GTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177
BLAST of DY257397 vs. ExPASy Swiss-Prot
Match: ATL2D_ARATH (Putative RING-H2 finger protein ATL2D OS=Arabidopsis thaliana GN=ATL2D PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1 Query: 361 GTECPVCLSAFADGEVVRQLSACKHSFHASCIDMWLKSHSNCPICR 498 G EC VCLS F D E++R L C+H+FH CID WL+ H+ CP+CR Sbjct: 121 GLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 166 The following BLAST results are available for this feature:
BLAST of DY257397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257397 ID=DY257397; Name=DY257397; organism=Citrus sinensis; type=EST; length=719bpback to top |