EY678415

Overview
NameEY678415
Unique NameEY678415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY678415 vs. ExPASy Swiss-Prot
Match: Y5848_ARATH (Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.260e-16
Identity = 58/146 (39.73%), Postives = 77/146 (52.74%), Query Frame = 3 
Query:   12 NGAAPEKAPATVASFTGMKPQLLVEAPKATDAVQFYKTAFGAVEIGRSVETKRKAEQELPLISCAQLEIAGSTFLVSDVSG--DSAAAQTVGTGCVLCLETEDXXXXXXXXXXXXXXXXXXXXXXXXXCCGERVGKVKDPYGFTWL 443
            NGA P +   T   FT  K  LLVEA K  DAV FYK+AFGA+E G S+  KRK +QELP +  ++L +AGS+F+V DVS     + A++ G+G    L T+D                           G + GKV DP+G TW+
Sbjct:   12 NGAGPVE---THLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE--LGFK-GKVTDPFGVTWI 151
The following BLAST results are available for this feature:
BLAST of EY678415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5848_ARATH2.260e-1639.73Uncharacterized protein At5g48480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-048-A07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678415 ID=EY678415; Name=EY678415; organism=Citrus sinensis; type=EST; length=968bp
CACGCGTCCGGAATGGAGCTGCGCCGGAGAAGGCTCCTGCTACCGTGGCC
AGCTTCACGGGGATGAAGCCGCAGTTGCTTGTGGAAGCACCGAAGGCTAC
TGACGCTGTTCAGTTCTACAAGACCGCGTTTGGTGCCGTGGAGATCGGCC
GTAGCGTGGAAACCAAACGCAAGGCTGAACAGGAGCTCCCACTCATCTCC
TGCGCTCAACTCGAGATTGCCGGCTCCACTTTCCTTGTCTCTGACGTTTC
CGGTGACTCTGCTGCTGCACAGACCGTGGGGACCGGATGCGTGCTTTGCT
TGGAGACCGAGGACGTGGAGGCTGCCGTCGCCAAGGCTGTGAGTGCTGGA
GCTGTTGCTGAGGGTGAGCTCGCTGAAGGCAACGGCGCGTGTTGTGGAGA
GCGCGTGGGAAAGGTCAAAGATCCTTATGGCTTCACTTGGCTCATTTGCT
CCCCGGTCAAGAAGTGCGCTGGCGTGGAAACTTAAAAGCCGCCGGATCTG
ATCTTTAAAATATTGATCTACTATCACATAACTCTCCTTTTGTCGTTCCT
CTTTTCCGGGTGGGGGGTTTAAACCTTCTAGGCTCTTTTTAAATATTTCG
GAAAATCTTGAAGAAATTGCTTAACCTTTAATCGGGATGAAGGGATGGTT
TTTTGAATAATTTTTGAAGGAACGGGAAACCGGGGCATTTTAAAAACTTT
CTGTGCACCCCCTTTTTAAAAATTTTTTTCCCCCTTCTCATTTTTTGTAA
AAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGCCCCTCCTAAAAGAGGA
TCCCCCACTTTTTAACTTTACCCGCGGGGCGGTGGGCCCACCCCCATAAA
CCCCCTCTTTTTTATAGTGGGGGGCCCCCCCAAATATTTTTTTTTTTTTT
TTTCCGGGGGGGGGCCCCCCCTTTTTTTTTTTTTTAAACCCCCACGCCCG
CCCGGGGGGGGGGAGGGG
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