DY257513

Overview
NameDY257513
Unique NameDY257513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2886 contig Csv1_Contig2886:154..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_ARATH (Uracil phosphoribosyltransferase OS=Arabidopsis thaliana GN=UPT1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.000e-54
Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 414
            +V+ SGESMENALRA          LIHR+GDNG+QL+YEKLPNDISERHVLLLDP+L TGNSA +AI LLI KGVPE +IIFLNLISAP+G+H VCK+FP +KIVTSEID  LNEEFRVIPG+GEFGDRYFGTDD
Sbjct:   62 SVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLVYEKLPNDISERHVLLLDPILGTGNSAVEAINLLISKGVPEGNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIDNGLNEEFRVIPGMGEFGDRYFGTDD 197          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_DICDI (Uracil phosphoribosyltransferase OS=Dictyostelium discoideum GN=uprt PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.472e-32
Identity = 67/137 (48.91%), Postives = 98/137 (71.53%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 414
            +++ +GESME  LRA          LI RD +    +L+Y KLP+DI+ R VLLLDP+LATG +  QA+++L+E+GV E +I+F+NL+++PEGI     ++P +K+VT EID  LNE+  +IPGLG+FG+ YFGT+D
Sbjct:   80 SIVRAGESMEAGLRAVCKHIKIGKILIQRDEETALPKLLYAKLPHDIANRQVLLLDPMLATGGTVTQAVEVLLERGVKEENIVFINLVASPEGIKVFTDKYPRVKVVTGEIDSHLNEKKYIIPGLGDFGNLYFGTED 216          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_TOXGO (Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.946e-30
Identity = 63/135 (46.67%), Postives = 94/135 (69.63%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            +++ +GESME+ LRA          LI RD    + +LIYEKLP DI +R V+LLDP+ AT  S  +AI++L+  GV E  IIF+N+++AP+GI  V K +P +++VT+ +D+ LN  + ++PG+G+FGDRYFGT
Sbjct:  109 SIVRAGESMESGLRAVCRGCRIGKILIQRDETTAEPKLIYEKLPADIRDRWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 243          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP1_SCHPO (Probable uracil phosphoribosyltransferase 1 OS=Schizosaccharomyces pombe GN=SPAC1B3.01c PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.442e-29
Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLI-YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            ++M +GESME  LR           LI RD +  K ++ Y KLP DIS+R+VLLLDP+LATG SA  A+++LI  G  +  IIFLN+I++PEG+  V  RFP+++IVT+ ID  L+    ++PGLG+FGD YFGT
Sbjct:   83 SIMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRYVLLLDPMLATGGSAICAMEILINMGCKQEQIIFLNVIASPEGLKNVHDRFPNIRIVTAVIDEGLDNNGYIVPGLGDFGDIYFGT 217          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP2_SCHPO (Probable uracil phosphoribosyltransferase 2 OS=Schizosaccharomyces pombe GN=SPAC1399.04c PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.097e-27
Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXL-IHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            +++ +GESME  L A          L + RD    + +L++ KLP D  +R VLLLDP+LATGNS   AIQ LI KG+PE +I+F+NLI+  EGI  V  +FP L++VT+ ID  LN    V+PG G+FGDRYFGT
Sbjct:   84 SILRAGESMEYGLAAACNYSVPVGKLLVQRDETTFEAKLMFCKLPKDAQDRLVLLLDPLLATGNSVILAIQTLINKGIPEENIVFVNLIACNEGITNVFAKFPKLRMVTASIDPELNANKYVVPGCGDFGDRYFGT 219          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_YEAST (Uracil phosphoribosyltransferase OS=Saccharomyces cerevisiae GN=FUR1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.552e-26
Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYF 402
            +++ +GESME  LR           LI RD +    +L YEKLP DISER+V LLDP+LATG SA  A ++LI++GV    I FLNLI + EGI      FP ++IVT  +D  L+E   ++PGLG+FGDRY+
Sbjct:   82 SIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPEDISERYVFLLDPMLATGGSAIMATEVLIKRGVKPERIYFLNLICSKEGIEKYHAAFPEVRIVTGALDRGLDENKYLVPGLGDFGDRYY 214          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UPP_SACKL (Uracil phosphoribosyltransferase OS=Saccharomyces kluyveri GN=FUR1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.457e-26
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYF 402
            +++ +GESME  LR           LI RD +    +L YEKLP+DI++R V LLDP+LATG SA  A ++LI++GV    I FLNLI + EGI     +FP++KIVT  +D  L+    +IPGLG+FGDRY+
Sbjct:   82 SIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPDDIADRFVFLLDPMLATGGSAIMATEVLIKRGVKPERIFFLNLICSKEGIENYHAKFPTIKIVTGALDKGLDANRYLIPGLGDFGDRYY 214          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UCKL1_MOUSE (Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26
Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            +++ +GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A  A+++L++  VPE  I  L+L+ A  G+H V   FP ++I+T+ +D  +N+ FR+IPG+G FGDRYFGTD
Sbjct:  398 SILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTD 533          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UCKL1_HUMAN (Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26
Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 1
Query:    7 TVMLSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 411
            +++ +GE+ME ALRA          LI  +   G+ +L Y +LP DIS+ HV+L+D  ++TG +A  A+++L++  VPE  I  L+L+ A  G+H V   FP ++I+T+ +D  +N+ FR+IPG+G FGDRYFGTD
Sbjct:  398 SILRAGETMEPALRAVCKDVRIGTILIQTNQLTGEPELHYLRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLDHDVPEDKIFLLSLLMAEMGVHSVAYAFPRVRIITTAVDKRVNDLFRIIPGIGNFGDRYFGTD 533          
BLAST of DY257513 vs. ExPASy Swiss-Prot
Match: UCKA_DICDI (Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22
Identity = 56/133 (42.11%), Postives = 85/133 (63.91%), Query Frame = 1
Query:   10 VMLSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 408
            V+ +G  ME  LR+          LI  D      L YEKLPN +++ HVL+LDP +ATG S+  AI++L++ GVPE+ IIF+++I++ +GI  +  RFP ++ V S ID  L++E  ++PG G + +RYFGT
Sbjct:  367 VLRAGGCMEQPLRSICKGIRTGKVLIQSDEMKKPHLFYEKLPN-VTDSHVLVLDPTIATGASSEMAIRVLLDHGVPENKIIFVSVIASLKGILYLNYRFPDVQFVVSAIDKELSDEGFILPGCGFYSNRYFGT 498          
The following BLAST results are available for this feature:
BLAST of DY257513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 481
Match NameE-valueIdentityDescription
UPP_ARATH3.000e-5475.74Uracil phosphoribosyltransferase OS=Arabidopsis th... [more]
UPP_DICDI2.472e-3248.91Uracil phosphoribosyltransferase OS=Dictyostelium ... [more]
UPP_TOXGO3.946e-3046.67Uracil phosphoribosyltransferase OS=Toxoplasma gon... [more]
UPP1_SCHPO7.442e-2949.63Probable uracil phosphoribosyltransferase 1 OS=Sch... [more]
UPP2_SCHPO9.097e-2749.26Probable uracil phosphoribosyltransferase 2 OS=Sch... [more]
UPP_YEAST1.552e-2648.12Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UPP_SACKL3.457e-2647.37Uracil phosphoribosyltransferase OS=Saccharomyces ... [more]
UCKL1_MOUSE5.896e-2642.65Uridine-cytidine kinase-like 1 OS=Mus musculus GN=... [more]
UCKL1_HUMAN5.896e-2642.65Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=... [more]
UCKA_DICDI3.028e-2242.11Uridine-cytidine kinase A OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2DG09FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257513 ID=DY257513; Name=DY257513; organism=Citrus sinensis; type=EST; length=633bp
GTTTCTACTGTGATGTTAAGTGGTGAAAGCATGGAAAATGCATTGCGTGC
ATGTTGCAAAGGAATAAAAATTGGAAAAATTCTGATTCACCGTGATGGGG
ACAATGGCAAACAGCTTATCTATGAGAAGCTGCCAAATGATATTTCAGAA
AGACATGTCCTGCTTCTAGATCCTGTTCTTGCCACAGGGAACTCTGCCAA
CCAAGCTATTCAACTACTCATAGAGAAAGGAGTTCCAGAATCCCACATAA
TATTCTTGAATCTCATCTCTGCTCCAGAGGGAATCCATTGTGTTTGCAAA
CGTTTTCCATCACTGAAAATTGTCACTTCAGAGATTGATGTTGCTTTGAA
TGAAGAATTCCGTGTGATACCTGGTCTGGGTGAGTTTGGCGACCGTTACT
TTGGCACTGATGATTGATAGGCTGAAGGTCAAGTAGTGGAGATTGTTAGC
TCTTATCAAATGGGTTGATTTCCCTAGAAATAACATAAATCAATATTTTG
AAAGCTGAGGGAGGCATGTTTCCTGAAAGACGAAAAATAAACAGAAAAGG
GGGGAAAAAAGTCTGAAGGGAGACCCCCACTTTGCAAAATATAATACAAA
TGCTGATTGTTCTCNNNNNNNAANAAAAAAAAA
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