EG358262

Overview
NameEG358262
Unique NameEG358262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6856 contig Csv1_Contig6856:45..288. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.396e-33
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TVDEVRKAQ A+GPATIMAIGTATPPNCVDQSTYPDYYFRITNSEH+TDLKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.633e-32
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.633e-32
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.662e-32
Identity = 61/70 (87.14%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+R+AQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.001e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+R AQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH+T+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.307e-31
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVR+AQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.707e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TVDE+R+AQ AEGPAT++AIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQ AEGPATI+AIGTATPPNCVDQSTYPDYYFRITNSEH+TDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.229e-31
Identity = 60/70 (85.71%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQ AEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNS+H+ +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358262 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.911e-31
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQGAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHLTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQ AEGPAT++AIGTATPPNC+DQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_CITSI1.396e-3394.29Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS2_SOYBN2.633e-3288.57Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS1_SOYBN2.633e-3288.57Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS5_SOYBN7.662e-3287.14Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_SOYBN1.001e-3187.14Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS2_CAMSI1.307e-3188.57Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSB_PEA1.707e-3187.14Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSY_VIGUN2.229e-3187.14Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS6_SOYBN2.229e-3185.71Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS1_CASGL2.911e-3187.14Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]

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Properties
Property NameValue
Genbank description12d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358262 ID=EG358262; Name=EG358262; organism=Citrus sinensis; type=EST; length=244bp
ACCCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGGAAGGCTCAAGGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACTTGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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