EG358261

Overview
NameEG358261
Unique NameEG358261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length244
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6856 contig Csv1_Contig6856:45..288. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.669e-35
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M+TVDEVRKAQRA+GPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.824e-33
Identity = 64/70 (91.43%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.824e-33
Identity = 64/70 (91.43%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.306e-33
Identity = 63/70 (90.00%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+R+AQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.930e-33
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+R AQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V E+R+AQRAEGPATI+AIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M++V+E+RKAQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNS+HM +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.544e-32
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVR+AQRAEGPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.439e-32
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQRA+GPATIMAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of EG358261 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.439e-32
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   35 MLTVDEVRKAQRAEGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 244
            M+TV+EVRKAQRAEGPAT++AIGTATPPNC+DQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_CITSI9.669e-3597.14Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS2_SOYBN1.824e-3391.43Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS1_SOYBN1.824e-3391.43Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS5_SOYBN5.306e-3390.00Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_SOYBN6.930e-3390.00Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHSY_VIGUN1.544e-3290.00Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS6_SOYBN1.544e-3288.57Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS2_CAMSI1.544e-3290.00Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS2_SOLTU3.439e-3291.43Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_CASGL3.439e-3288.57Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]

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Properties
Property NameValue
Genbank description12c1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012c1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358261 ID=EG358261; Name=EG358261; organism=Citrus sinensis; type=EST; length=244bp
ACGCGGGGAACCGTTGGATTGGAAGCAACAAACAATGTTGACCGTCGATG
AAGTTCGCAAGGCTCAACGTGCCGAAGGTCCGGCCACGATCATGGCCATT
GGAACGGCAACCCCTCCGAATTGTGTTGATCAAAGCACGTATCCGGATTA
TTATTTTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAAT
TCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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