CN191390

Overview
NameCN191390
Unique NameCN191390
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.493e-39
Identity = 84/125 (67.20%), Postives = 87/125 (69.60%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DM+ EE VK F A            +PMALIKK  K KR  P GEKPEPV  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPGIG T SSRFI  K
Sbjct:   27 DLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.109e-38
Identity = 84/125 (67.20%), Postives = 86/125 (68.80%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLD   DM  +E VK F A            KPMALIKK  K KR  PPGEKPEPV  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPGIG T SSRFI  K
Sbjct:   29 DLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38
Identity = 83/125 (66.40%), Postives = 88/125 (70.40%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DMS ++ VK FS+            KPMALIKK  K KR  P GEKPEPV  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPG+G T SSRFI  K
Sbjct:   28 DLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.892e-38
Identity = 83/125 (66.40%), Postives = 88/125 (70.40%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DMS ++ VK FS+            KPMALIKK  K KR  P GEKPEPV  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPG+G T SSRFI  K
Sbjct:   28 DLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.602e-37
Identity = 82/125 (65.60%), Postives = 87/125 (69.60%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DMS ++ V+ F A            KPMALIKK  K K+  P GEKPEPV  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPGIG T SSRFI  K
Sbjct:   30 DLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS155_ARATH (40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.945e-36
Identity = 81/125 (64.80%), Postives = 85/125 (68.00%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DMS E+ VK FS+            KPMALIKK  K K   P GEKP  V  HL NMIIVPEMIGSI G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPG+G T SSRFI  K
Sbjct:   25 DLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 149
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS153_ARATH (40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 78/125 (62.40%), Postives = 84/125 (67.20%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DMS ++ VK F +            KPMALIKK  K K   P GEKP  V  HL NMIIVPEMIGS+ G YNGKTFNQVEIKPE IGH+L EF  SYKPVK GRPG+G T SSRFI  K
Sbjct:   26 DLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS152_ARATH (40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33
Identity = 72/125 (57.60%), Postives = 83/125 (66.40%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLDA  DM  ++ V+ F +            KPMALIKK  K K   P GEKPE V  HL NM+I+PEMIGSI G YNGKTFNQ+EIKPE IGH+L EF  +YKPV+ G+PG G T SSRFI  K
Sbjct:   28 DLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS15_BOVIN (40S ribosomal protein S15 OS=Bos taurus GN=RPS15 PE=2 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.456e-32
Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLD   DMS E+ ++ +SA            K  +L+K+  K K+  PP EKPE V  HL +MII+PEM+GS+ G YNGKTFNQVEIKPE IGH+LGEF  +YKPVK GRPGIG T SSRFI  K
Sbjct:   21 DLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKDAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
[Close]
BLAST of CN191390 vs. ExPASy Swiss-Prot
Match: RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.514e-32
Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = -2 
Query:  277 DLDAFFDMSKEEFVKFFSAXXXXXXXXXXXXKPMALIKKFCKGKRGVPPGEKPEPVCPHLGNMIIVPEMIGSIFGGYNGKTFNQVEIKPEKIGHFLGEFFFSYKPVKPGRPGIGVTPSSRFILFK 651
            DLD   DMS E+ ++ +SA            K  +L+K+  K K+  PP EKPE V  HL +MII+PEM+GS+ G YNGKTFNQVEIKPE IGH+LGEF  +YKPVK GRPGIG T SSRFI  K
Sbjct:   21 DLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
The following BLAST results are available for this feature:
BLAST of CN191390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
RS15_PICMA8.493e-3967.2040S ribosomal protein S15 OS=Picea mariana GN=RPS1... [more]
RS15_ELAOL1.109e-3867.2040S ribosomal protein S15 OS=Elaeis oleifera GN=RP... [more]
RS154_ARATH1.892e-3866.4040S ribosomal protein S15-4 OS=Arabidopsis thalian... [more]
RS151_ARATH1.892e-3866.4040S ribosomal protein S15-1 OS=Arabidopsis thalian... [more]
RS15_ORYSJ1.602e-3765.6040S ribosomal protein S15 OS=Oryza sativa subsp. j... [more]
RS155_ARATH3.945e-3664.8040S ribosomal protein S15-5 OS=Arabidopsis thalian... [more]
RS153_ARATH3.340e-3562.4040S ribosomal protein S15-3 OS=Arabidopsis thalian... [more]
RS152_ARATH9.095e-3357.6040S ribosomal protein S15-2 OS=Arabidopsis thalian... [more]
RS15_BOVIN3.456e-3256.8040S ribosomal protein S15 OS=Bos taurus GN=RPS15 P... [more]
RS15_RAT4.514e-3256.8040S ribosomal protein S15 OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005B19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191390 ID=CN191390; Name=CN191390; organism=Citrus sinensis; type=EST; length=655bp
TTTTTTTTTTTTTTTTTAAGCTAATCAAAATATGAAATAATTGGCAGGGC
CGTATGAAAACAAACACAACTTTTGGCTGACATAAAAATACCCTCATATC
CAAGCCCCATAACCCCTCTTTAAACTACACATTAATTCCTTTATCTAAAT
TAACAACTCAAACGCTAGTATTTAGCCCAACAACCAAAAAAATGTAACCC
CAAAAAATTTGATCAACTTCAATGTTTTCTGAAAAAAACAAAAAACTAAA
ATTCCAAAAATCCCGCATACATCTCACTTAAAAAGAATGAACCTTGAGGA
AGGGGTAACACCAATACCAGGTCTACCGGGCTTCACAGGCTTGTATGAAA
AAAAAAACTCCCCCAGGAAATGCCCAATCTTTTCCGGCTTGATTTCAACC
TGATTAAAGGTCTTGCCATTGTACCCTCCAAAAATGCTTCCAATCATTTC
AGGAACAATGATCATGTTTCCCAAATGGGGGCAAACTGGTTCAGGCTTCT
CACCAGGCGGAACCCCCCTTTTCCCCTTGCAAAACTTCTTGATCAAAGCC
ATGGGCTTCCTCTTTAAACCCCTCTGAAACCTTCTGCGCCCACGTGCACT
GAAAAACTTGACAAACTCCTCTTTGGACATATCAAAAAAAGCGTCCAAAT
CCCCC
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