CN191377

Overview
NameCN191377
Unique NameCN191377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 7.640e-57
Identity = 127/216 (58.80%), Postives = 145/216 (67.13%), Query Frame = -3
Query:  344 PIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR-KKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXEKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTSDSVPKLN-TDSSCSEHVVSPEFTCEVQSEPKMQPW-------ENTLGFPYNYLDSTMDISFNSQFQGNNQLSPLQDMFMYLPKPF 964
            PIG PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS R KKNSLRLDDWVLCRIYNKKG+ E++       P          E+KP V    M          P P  T       +++ YFDTSDSVPKL+ TDSSCSE VVSPEFT EVQSEPK + W        NTL F +NY+D+T+D +F      +NQ+ PLQDMFMY+ KP+
Sbjct:   96 PIGLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGP-----PPPVVYGDEIMEEKPKVTEMVMP---------PPPQQT-------SEFAYFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQSEPKWKDWSAVSNDNNNTLDFGFNYIDATVDNAFGGG-GSSNQMFPLQDMFMYMQKPY 289          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.863e-49
Identity = 112/213 (52.58%), Postives = 132/213 (61.97%), Query Frame = -3
Query:  344 PIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXEKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFD-TSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGF--PYNYLDSTMDISFN---SQFQGNNQLSPLQDMFMYLPKPF 964
            P+G PKPV IKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG +EK                   ++KP+V   G++ + S     P     V G    +   Y+D  SDS+P+L+ DSSCSE V+SPEF CEVQS+PK+  WE T     P N   S +D + +       G      LQD+ MY  KPF
Sbjct:   98 PVGSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGM-VSSGGGVQRKPMV---GVNAAVSSP---PEQKPVVAGPAFPDLAAYYDRPSDSMPRLHADSSCSEQVLSPEFACEVQSQPKISEWERTFATVGPINPAASILDPAGSGGLGGLGGGGSDPLLQDILMYWGKPF 303          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.228e-30
Identity = 94/225 (41.78%), Postives = 115/225 (51.11%), Query Frame = -3
Query:  335 PIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXEKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTSDSVPKLNT-DSSCSEHVVSPEFTC----EVQSEPKMQPWENTL------GFPYNYLDSTMDISFNSQFQGNNQLSPLQDMFM--YLPKPF*IW 964
            PIG+PK +GIKKALVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK                         +P+  +K T                                K++T DS CS HV+SP+ TC    EV+SEPK    E+ L         ++ +    + +F  QFQ   Q S   D F   +  KPF  W
Sbjct:  139 PIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEK------------------------YLPAAAEKPTE-------------------------------KMSTSDSRCSSHVISPDVTCSDNWEVESEPKWINLEDALEAFNDDTSMFSSIGLLQNDAFVPQFQ--YQSSDFVDSFQDPFEQKPFLNW 306          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.160e-29
Identity = 78/172 (45.35%), Postives = 93/172 (54.07%), Query Frame = -3
Query:  518 PIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKK-------NSLRLDDWVLCRIYNKKGSIEKKQQVTNRRPNFXXXXXXXXEKKPVVMPSGMDKSTSGGALIPNPASTVTGTGTVNDYMYFDTS----------------DSVPKLNTDSSCSEHVVSP 964
            P+G P+ V IKKALVFYAGK PKG KTNWIMHEYRLADVDRSA  +       N+LRLDDWVLCRIYNKKG IE+   V                    V P+    +  GG  I            ++DY ++D                  DS+P+L+TDSS SEHV+SP
Sbjct:   98 PVGSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYDTVDAGED---------------VKPAAAAAAAKGGR-IGGGGGAAAMKVELSDYGFYDQEPESEMLCFDRSGSADRDSMPRLHTDSSGSEHVLSP 253          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.966e-20
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = -3
Query:  761 PIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS-ARKKNSLRLDDWVLCRIYNKKGSIEK 964
            P G  + VGIKKALVFY+GKAP+G KT+WIMHEYRLAD DR+   KK S +LD+WVLCR+YNKK + EK
Sbjct:  113 PKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.034e-17
Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  770 GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLAD-----VDRSARKKNSLRLDDWVLCRIYNKKGS 958
            G  K VG+KKALVFY+GK PKG K++WIMHEYRL D     +     KKNSLRLDDWVLCRIY K  S
Sbjct:  113 GGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNS 180          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.656e-17
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = -3
Query:  758 VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKK 943
            VGIKKALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K+
Sbjct:  111 VGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.531e-17
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = -3
Query:  758 VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKK 943
            VGIKKALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K+
Sbjct:  111 VGIKKALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.918e-17
Identity = 47/66 (71.21%), Postives = 51/66 (77.27%), Query Frame = -3
Query:  746 VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKKQQVT 943
            VGIKKALVFYAGKAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q VT
Sbjct:  111 VGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAVT 172          
BLAST of CN191377 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.722e-16
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = -3
Query:  770 VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN-SLRLDDWVLCRIYNKKGS 943
            VG+KKALVFY G+ PKG KT+WIMHEYRL D  +++ K+N S+RLD+WVLCRIY K+G+
Sbjct:  106 VGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGA 164          
The following BLAST results are available for this feature:
BLAST of CN191377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NAC2_ARATH7.640e-5758.80NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC48_ORYSJ5.863e-4952.58NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NA102_ARATH1.228e-3041.78NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC71_ORYSJ5.160e-2945.35NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC68_ORYSJ1.966e-2068.12NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC18_ARATH2.034e-1764.71NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC19_ARATH2.656e-1767.74NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH4.531e-1767.74NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH5.918e-1771.21NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC29_ARATH1.722e-1666.10NAC domain-containing protein 29 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005B08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191377 ID=CN191377; Name=CN191377; organism=Citrus sinensis; type=EST; length=966bp
TTTTTAAACAAAATAAGACACACTAACTGATTTGATATAACANTTTTTGG
AACACTACATTTAATAACTTCCTAAAAAAAAAGAAAAATTAAAACATATT
AACATCATCACATGCCGCGTGCTGTACACATGCTAATGATTAATGATTAT
ATGCTTGCAAATCCAGCATTAACCGTCCGATCAATCAGACCAATCGTCCG
AAAGAACGTAGGGCTTACTATATCGTCAACTGGGCCCCGCACCGCACAGG
CACACTCATTGACTTTCGTCTCGTGTTGCCTCTTTCAAGGCCAGGCCAGG
CCAGGCCAGCCCGTCTATGGTCCATCCACTCGACCCAAATTTAAAAGGGT
TTCGGAAGGTACATGAACATATCCTGCAACGGCGACAGCTGATTGTTTCC
CTGAAACTGAGAATTGAAGCTTATGTCCATGGTGGAATCCAAGTAATTAT
ATGGAAAACCAAGGGTGTTTTCCCAGGGTTGCATTTTAGGCTCGCTCTGC
ACCTCGCACGTGAACTCCGGTGACACCACGTGCTCCGAGCAACTCGAGTC
CGTGTTCAGCTTCGGCACCGAATCCGACGTGTCAAAATACATGTAATCAT
TCACTGTTCCCGTTCCTGTTACGGTCGACGCCGGATTCGGAATCAGTGCT
CCTCCTGACGTTGACTTGTCCATGCCACTTGGCATAACCACCGGTTTCTT
CTCCTCCGTCTCCGTCTCCGTCTCCGTAAAATTCGGCCTCCGATTAGTGA
CCTGCTGTTTTTTCTCAATAGATCCCTTCTTGTTGTATATGCGACACAGC
ACCCAATCGTCCAGCCTTAAGCTGTTCTTCTTACGAGCCGAGCGATCCAC
GTCAGCTAACCGATACTCGTGCATAATCCAGTTGGTTTTCTCTCCTTTAG
GCGCTTTTCCGGCGTAAAAAACAAGAGCCTTCTTAATTCCAACGGGCTTC
GGCTGGCCAATCGGCT
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