EG358258

Overview
NameEG358258
Unique NameEG358258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length261
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13721 contig Csv1_Contig13721:345..605. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.638e-13
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = -3
Query:   35 VEESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 241
            V E ILP+   TS  +K    +D++M+  NPGGKERT+ EF  LA GAGF+G R  C     WVMEF+K
Sbjct:  291 VAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.003e-11
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = -3
Query:   35 VEESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 241
            V E ILP+   T+  ++    IDV+M+  NPGGKERT+ EF  LA GAGF G        N WVMEF K
Sbjct:  286 VAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.003e-11
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = -3
Query:   35 ESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 235
            E ILP    TS  +K    IDV+M+  NPGGKERT+ EF  LA G+GF GIR  C   N +V+EF K
Sbjct:  297 ECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.416e-11
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = -3
Query:   35 VEESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 241
            V E ILP    +S  +K    IDV+M+  NPGGKERT+ EF  LA GAGF G +  C   N ++MEF K
Sbjct:  295 VAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.610e-11
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = -3
Query:   35 ESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 235
            E +LP+   TS  ++    +DV+M+  NPGGKERT+ EF  LA GAGF   R  C   N W+ME  K
Sbjct:  284 ECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of EG358258 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.938e-11
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = -3
Query:   35 ESILPDLLGTSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 235
            E ILP    +S  +K    IDV+M+  NPGGKERT+ EF  LA GAGF G    C   N +V+EF K
Sbjct:  297 ECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
The following BLAST results are available for this feature:
BLAST of EG358258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
COMT1_CAPAN1.638e-1350.72Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_ZINEL2.003e-1149.28Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_ROSCH2.003e-1152.24Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_MEDSA3.416e-1149.28Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_COFCA7.610e-1146.27Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_PRUDU9.938e-1149.25Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
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Properties
Property NameValue
Genbank description5f5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005f5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358258 ID=EG358258; Name=EG358258; organism=Citrus sinensis; type=EST; length=261bp
ACAATTCTTAGAATTAATGGGCATTCACAGGCTACTTATAGAACTCCATA
ACCCATAAATTACAAGTAAAACATTCAAATCTGATGCCACTAAATCCAGC
TCCAGTAGCCAAGGTCATGAATTCATGCTTTGTTCGCTCCTTTCCTCCCG
GATTTTGAGTCATCATCAGCACATCAATTTGGGAATTTCTTTTTGATAGA
GTGCTAGTCCCAAGCAGATCTGGAAGTATTGACTCCTCAACATTACCTTC
CCTCCGTCGGG
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