EG358255

Overview
NameEG358255
Unique NameEG358255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length289
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6856 contig Csv1_Contig6856:1..288. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.992e-35
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.865e-33
Identity = 64/70 (91.43%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+E+RKAQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.865e-33
Identity = 64/70 (91.43%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+E+RKAQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.426e-33
Identity = 63/70 (90.00%), Postives = 70/70 (100.00%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+E+R+AQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRQAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.086e-33
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+E+R AQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.579e-32
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V E+R+AQRA+GPATI+AIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.579e-32
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MV+V+E+RKAQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNS+HM +LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.579e-32
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVRKAQRA+GPATIMAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRKAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.579e-32
Identity = 63/70 (90.00%), Postives = 69/70 (98.57%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVR+AQRA+GPAT+MAIGTATPPNCVDQSTYPDYYFRITNSEH T+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYM 70
[Close]
BLAST of EG358255 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.517e-32
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 2 
Query:   80 MVTVDEVRKAQRAQGPATIMAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFKRMCDKSMIKKRYM 289
            MVTV+EVR+AQRA+GPATIMAIGTATP NCVDQSTYPDYYFRITNSEHMT+LKEKFKRMCDKSMI KRYM
Sbjct:    1 MVTVEEVRRAQRAKGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYM 70
The following BLAST results are available for this feature:
BLAST of EG358255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS1_CITSI1.992e-35100.00Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS2_SOYBN1.865e-3391.43Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS1_SOYBN1.865e-3391.43Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS5_SOYBN5.426e-3390.00Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_SOYBN7.086e-3390.00Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHSY_VIGUN1.579e-3290.00Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHS6_SOYBN1.579e-3288.57Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS2_SOLTU1.579e-3292.86Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS2_CAMSI1.579e-3290.00Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS2_SOLLC3.517e-3291.43Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]

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Properties
Property NameValue
Genbank description10b4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358255 ID=EG358255; Name=EG358255; organism=Citrus sinensis; type=EST; length=289bp
ACGCGGGGATACAAAGTTATAAAACATCAACAAGAGCTAGATAGGTCTCC
GGGAACCGCTCGATTGGAAGCAACAAACAATGGTGACCGTCGATGAAGTT
CGCAAGGCTCAACGTGCCCAAGGTCCGGCCACGATCATGGCCATTGGAAC
GGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGGATTATTATT
TTCGCATCACAAATAGTGAACACATGACTGATCTTAAAGAGAAATTCAAG
CGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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