EG358253

Overview
NameEG358253
Unique NameEG358253
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length292
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 9.877e-27
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.877e-27
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.877e-27
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.877e-27
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.874e-26
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            ++P+LGKEAAT+AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.874e-26
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAATKAIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKR+MM
Sbjct:  106 EVPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.753e-26
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  101 EVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.753e-26
Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAA KAIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  106 EVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 164
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.753e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VP+LGKEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  104 EVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 162
[Close]
BLAST of EG358253 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.902e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 
Query:    2 QVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 178
            +VPRLGKEAA+KAIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  106 EVPRLGKEAASKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 164
The following BLAST results are available for this feature:
BLAST of EG358253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_BETVE9.877e-2794.92Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS3_CAMSI9.877e-2794.92Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS2_CAMSI9.877e-2794.92Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS1_CAMSI9.877e-2794.92Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYDMC2.874e-2691.53Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS7_PICMA2.874e-2691.53Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHSY_HYPAN3.753e-2693.22Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSY_CARAN3.753e-2693.22Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHSY_CALCH3.753e-2691.53Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHSY_PETCR4.902e-2691.53Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]

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Properties
Property NameValue
Genbank description9b1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0009b1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358253 ID=EG358253; Name=EG358253; organism=Citrus sinensis; type=EST; length=292bp
ACATCATGAGACGTTTGACGGATGGGCGAAGGCCCAAGAGTTTTGTGAGC
CGGTAATCGGCCCCGGGCATGTCAACACCGCTAGTGGTGCAAAAGACCAA
GTGGGTGATTTTGGACTTGGGCTGGCCCCATTCTTTAATGGCCTTGGTGG
CTGCTTCTTTGCCGAGCCTCGGTACCTGCCCGGGCGGCCGCTCGATGCAC
GTGGTTATGTTGCAGCCCTGTCTCTTGGTGCTCAAGGCATCTGCTTAGGC
ACAAGGTTTGTGGCAAGTGAGGAAAGCTATGCGCATCCTGAG
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