DY257345

Overview
NameDY257345
Unique NameDY257345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1299
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6585 contig Csv1_Contig6585:1..1299. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY257345 vs. ExPASy Swiss-Prot
Match: Y637_PELLD (UPF0301 protein Plut_0637 OS=Pelodictyon luteolum (strain DSM 273) GN=Plut_0637 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.327e-11
Identity = 54/161 (33.54%), Postives = 77/161 (47.83%), Query Frame = 2 
Query:   35 GCLLIATEKLDGVHIFERTVILILSMEPMGPSGIILNRPSLMSIKEMRSTVLDAAGTFS--DRPLFFGGPLEEGL--FLVSPKGGGDEVGKSGVFEQVMEGLYFG-TKETVGCAAEMVKRNAVGPEDFRFFDGCCGWEKEQLNEEIRAGYWTVAACSPGVI 502
            G LLIA+  L   + F+RTV+++    P G  G ILNRP    ++E       A   F   D PL  GGP++     FL      GD +  S   EQ++ GLY+G  +E +G    ++    + P + RFF G  GW   QL  E   G W  A  +P ++
Sbjct:   13 GKLLIASANLLESN-FKRTVLMMCEHNPQGSLGFILNRPMEFQVRE-------AVAGFDEVDEPLHMGGPVQSNTVHFLHMR---GDLIDGS---EQILPGLYWGGDREELGY---LLNTGVLKPSEIRFFLGYAGWSAGQLEAEFEEGSWYTADATPAMV 156
The following BLAST results are available for this feature:
BLAST of DY257345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y637_PELLD7.327e-1133.54UPF0301 protein Plut_0637 OS=Pelodictyon luteolum ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AD06FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257345 ID=DY257345; Name=DY257345; organism=Citrus sinensis; type=EST; length=1299bp
CAAATGGGCTCATACAATCCATGAGCCCGAAAAGGGCTGCTTGCTCATTG
CAACCGAGAAGCTTGACGGGGTCCACATCTTCGAACGGACGGTGATCCTA
ATCTTATCAATGGAGCCCATGGGCCCATCAGGGATCATACTCAACCGGCC
GTCCCTAATGTCCATCAAGGAGATGCGTTCGACGGTGCTAGACGCAGCGG
GGACATTCTCCGACCGACCGTTGTTCTTCGGAGGACCTTTAGAAGAAGGG
TTGTTTTTGGTGAGCCCAAAAGGGGGTGGTGATGAAGTGGGGAAGAGTGG
GGTGTTTGAGCAAGTGATGGAAGGATTGTATTTTGGGACTAAAGAGACTG
TTGGTTGCGCTGCTGAAATGGTGAAGAGAAATGCAGTTGGGCCTGAGGAT
TTTAGGTTCTTCGATGGGTGTTGTGGGTGGGAGAAAGAGCAATTGAATGA
GGAAATTAGGGCTGGTTATTGGACGGTGGCTGCGTGTAGCCCAGGTGTAA
TTGGGCTAGAAAGCGGAACTCTTGGGCTCTGGGAAGAGCTTCTTTGGCTC
ATGGGCCGTACAACAGTTTGGTGAGCCCCGACTCTATTCCTTAGATAGTC
GGGGGCAATTATATTTGTGTCACGGTGTGGCCACATGCGTGGTGGGTTTG
TGTAAAATGCGACAAGACATCAGCAATTTTGGGCTAGCACTGCATGGGTA
AAGATCTCCACAGTCTTGTTATGGGTTACATCTTTTTATCCCAAAAAAAG
ATATAATAAAATCGTTCGCAATTTCCGAGGATGAGAAAAAGAAAGAAAAA
AAGCCCCTCCATTCTTTGCTCATCTGGAAATGGGAAGAAGCATAAGAAAA
AAACTTGGTGTCCACAAGCCGGTGCCCATTAAGCCAAACTTAGATTCTAA
ATGGCCTCCAGGCTTTATTCCCCCAAGAGGGTGAATGTGTAGGGGGAAAA
AAACCGTTAACCGGGGGACTCTTCCCCCGGTTCCCAAAAACCACAAAACG
TATCTGTCCTAATAATAAAAGGGAGGCCCCCATTTAAAAAGAACCTTTTG
GAAGGGCCCATTAGCTTTTTAAATATAAAAAGATGGGAGGGAGAGAGAAA
CAACCAAATTTATTGGAGAAGAGCGCTTTCTCAAGCTGCTATAAAAGAAT
AATGAACAAGAGGGGTTTGTCTTGTGGGTGGGGGGTGTTGTTTTTCTGGT
TCCGGGGGAATAAAAAAAAAAAAAACCAACACAACCTCCCTTTCTAATTT
CTTTTTGCAAAATAAACTCCTCTCGCCGCGCTTTCCACTAAAAAAGAAA
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