CN191265

Overview
NameCN191265
Unique NameCN191265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: LEA14_GOSHI (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.240e-63
Identity = 116/151 (76.82%), Postives = 136/151 (90.07%), Query Frame = 1
Query:  106 MAQFLDKAKNFVAEKMANIEKPEAEITDVDLKNVSREAVEYDAKVSVDNPYSHSLPICEISYTFKSAGKVIASGTMADPGSLKGNDKTLLQVPMKVPPNILVSLAKDIGADWDIDYEVELGLTIDLPIIGNFTIPLSKKGEFKLPSLSDIF 558
            M+Q L+KAK+FV +K+ANI+KPEA ++DVDLK+VSRE VEY AKVSV NPYSHS+PICEISY F+SAG+ IASGT+ DPGSLK +D T+L VP+KVP NILVSL KDIGADWDIDYE+ELGLTIDLPI+GNFTIPLS+KGE KLP+LSDIF
Sbjct:    1 MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEISYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYELELGLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.336e-59
Identity = 109/151 (72.19%), Postives = 131/151 (86.75%), Query Frame = 1
Query:  106 MAQFLDKAKNFVAEKMANIEKPEAEITDVDLKNVSREAVEYDAKVSVDNPYSHSLPICEISYTFKSAGKVIASGTMADPGSLKGNDKTLLQVPMKVPPNILVSLAKDIGADWDIDYEVELGLTIDLPIIGNFTIPLSKKGEFKLPSLSDIF 558
            M+Q LDKAKN+VAEK+ N+ KPEA +TDVD K VSR++VEY AKVSV NPYS  +PICEI Y+ KSAGK IASGT+ DPGSLK +D T+L VP+KVP +IL+SLAKDIGADWDIDY+++LGL IDLP+IGNFTIPLS+KGE KLP+LSD+F
Sbjct:    1 MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 151          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: DRPD_CRAPL (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.047e-53
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 1
Query:  106 MAQFLDKAKNFVAEKMANIEKPEAEITDVDLKNVSREAVEYDAKVSVDNPYSHSLPICEISYTFKSAGKVIASGTMADPGSLKGNDKTLLQVPMKVPPNILVSLAKDIGADWDIDYEVELGLTIDLPIIGNFTIPLSKKGEFKLPSLSDIF 558
            MAQ ++KAKNFVAEK+AN+EKP+A + DVDLK+V R  + Y  ++ V+NPYS S+P+ EI YT KSAG+VI SG + DPGSLKGNDKT+L+  +KVP + LVSL KDIGAD DIDY +ELGL +DLP+IGNFTIPLS KGE KLP LSDIF
Sbjct:    1 MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEIKYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLELGLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: LEA14_ARATH (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana GN=LEA14 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.195e-53
Identity = 96/151 (63.58%), Postives = 121/151 (80.13%), Query Frame = 1
Query:  106 MAQFLDKAKNFVAEKMANIEKPEAEITDVDLKNVSREAVEYDAKVSVDNPYSHSLPICEISYTFKSAGKVIASGTMADPGSLKGNDKTLLQVPMKVPPNILVSLAKDIGADWDIDYEVELGLTIDLPIIGNFTIPLSKKGEFKLPSLSDIF 558
            MA  LDKAK+FVA+K+  I KPE  +TDVDLK+V+R++VEY AKVSV NPYSHS+PICEIS+TF SAG+ I  G + DPGSLK  D T L +P+ VP +IL +LA+D+G DWDIDYE+++GLTIDLP++G FTIP+S KGE KLP+  D F
Sbjct:    1 MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: LEA2R_ARATH (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana GN=At2g46140 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.583e-48
Identity = 92/163 (56.44%), Postives = 123/163 (75.46%), Query Frame = 1
Query:   70 EIVKKKLRIEEDMAQFLDKAKNFVAEKMANIEKPEAEITDVDLKNVSREAVEYDAKVSVDNPYSHSLPICEISYTFKSAGKVIASGTMADPGSLKGNDKTLLQVPMKVPPNILVSLAKDIGADWDIDYEVELGLTIDLPIIGNFTIPLSKKGEFKLPSLSDIF 558
            ++V++K  +   ++  LDKAK F AEK+ANI  PEA + DVD K V+R+ V+Y AKVSV NPYS S+PIC+ISY  KSA + IASGT+ DPGSL G+  T+L VP+KV  +I VSL KD+  DWDIDY++++GLT D+P++G+ TIP+S +GE KLPSL D F
Sbjct:    7 KVVEEKASV---ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 9.175e-26
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 3
Query:  642 VGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK 815
            VGMLADPKEARAG+REVHFFPFNPVDKRTALTY+DSDG+WHRASKGAPEQIL LCN K
Sbjct:  379 VGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASKGAPEQILNLCNCK 436          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 3
Query:  642 VGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK 815
            VGMLADPKEARAGIREVHF PFNPVDKRTALTYID+DG+WHRASKGAPEQIL LCN K
Sbjct:  379 VGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASKGAPEQILTLCNCK 436          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 3
Query:  642 VGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK 815
            VGMLADPKEARAGIREVHF PFNPVDKRTALTYID++ +WHRASKGAPEQIL LCNAK
Sbjct:  382 VGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRASKGAPEQILDLCNAK 439          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.034e-24
Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 3
Query:  642 VGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK 815
            VGMLADPKEARAGIREVHF PFNP DKRTALTYID++G+WHRASKGAPEQI+ LCN K
Sbjct:  379 VGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASKGAPEQIITLCNCK 436          
BLAST of CN191265 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 6.575e-24
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 3
Query:  642 VGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGHWHRASKGAPEQILALCNAK 815
            VGMLADPKEARAGIREVHF PFNPVDKRTALTYIDSDG+WHR SKGAPEQIL L NA+
Sbjct:  379 VGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSKGAPEQILDLANAR 436          
The following BLAST results are available for this feature:
BLAST of CN191265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
LEA14_GOSHI4.240e-6376.82Late embryogenesis abundant protein Lea14-A OS=Gos... [more]
LEA14_SOYBN6.336e-5972.19Desiccation protectant protein Lea14 homolog OS=Gl... [more]
DRPD_CRAPL1.047e-5366.89Desiccation-related protein PCC27-45 OS=Craterosti... [more]
LEA14_ARATH5.195e-5363.58Probable desiccation-related protein LEA14 OS=Arab... [more]
LEA2R_ARATH8.583e-4856.44Desiccation-related protein At2g46140 OS=Arabidops... [more]
PMA5_ARATH9.175e-2691.38ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ3.486e-2591.38Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA4_NICPL3.855e-2489.66Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA1_WHEAT5.034e-2486.21Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA1_ARATH6.575e-2489.66ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0004N19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004N19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191265 ID=CN191265; Name=CN191265; organism=Citrus sinensis; type=EST; length=816bp
GAGGTCTCAATCAAATCTGAATCCAGATAACCCTTGTGGTCTGTTTACAC
TGTGTGTCCGAATTAAATCGAAATTGTAAAGAAGAAGTTGAGAATAGAAG
AAGATATGGCGCAGTTCCTGGACAAGGCGAAGAACTTCGTGGCAGAGAAG
ATGGCAAACATAGAGAAGCCAGAGGCTGAAATCACAGACGTCGATCTCAA
GAACGTCAGTCGTGAAGCCGTCGAGTACGACGCCAAGGTCTCCGTTGATA
ACCCCTACAGCCATTCTCTTCCCATTTGTGAGATCTCCTACACTTTCAAA
AGCGCCGGCAAAGTGATAGCGTCGGGAACAATGGCGGACCCGGGCTCTCT
GAAAGGGAACGACAAGACCTTGCTGCAGGTGCCGATGAAGGTGCCCCCCA
ACATCCTGGTGAGCTTGGCCAAGGACATTGGAGCCGACTGGGATATTGAT
TATGAGGTGGAGCTGGGTCTCACCATTGATCTCCCTATCATCGGCAACTT
CACCATTCCTCTCTCTAAGAAAGGAGAGTTCAAGCTTCCTTCTCTCTCTG
ATATTTTTTAGTTTAGCTTAGTTTGTCTCTCCCTTTGCGAGCTTGTTACA
TTAATAATAATAATAATAATAATAATGGACTATGATATCCAGTTGGAATG
CTTGCAGACCCGAAGGAGGCTCGAGCTGGTATCAGAGAGGTGCATTTCTT
CCCATTCAATCCTGTGGATAAGAGGACTGCTTTGACCTACATTGATTCTG
ATGGCCACTGGCACCGAGCAAGCAAAGGTGCACCTGAGCAGATCTTGGCT
CTTTGCAATGCCAAGG
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