DY257338

Overview
NameDY257338
Unique NameDY257338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1294
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6583 contig Csv1_Contig6583:1..1294. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 2.823e-55
Identity = 104/127 (81.89%), Postives = 115/127 (90.55%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTPTCS+KHVPGFIEKA+ELKSKGV EI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDILKAL
Sbjct:   36 KKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.311e-52
Identity = 99/127 (77.95%), Postives = 113/127 (88.98%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTPTCS+ HVPGFI KA+ELKSKG+ EI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DILKAL
Sbjct:   36 KKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 2.473e-51
Identity = 97/127 (76.38%), Postives = 112/127 (88.19%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTPTCS+ HVPGFI KA+ELKSKG+ EI+C SVNDPFVMKAW KT+ ENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DILKAL
Sbjct:   36 KKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 3.343e-48
Identity = 93/127 (73.23%), Postives = 109/127 (85.83%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  +FGVPGAFTPTCS +HVPGFI +A++LK+KGV +IL +SVNDPFVMKAWAK++PENK VKFLADG   YT ALGLELDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++ILKAL
Sbjct:   36 KKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 1.317e-36
Identity = 78/129 (60.47%), Postives = 96/129 (74.42%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K++ +F VPGAFTPTCS KHVPGF+ KA EL+SKG+  I CISVND FVM+AW K    N  V  L+DG+ ++T  LG+ELDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+LKAL
Sbjct:  106 KKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.233e-34
Identity = 76/130 (58.46%), Postives = 98/130 (75.38%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            +++ +F VPGAFTPTCS KH+PGFIEKA EL +KGV  I C+SVND FVM+AW ++    +  V  L+DG+ + T ALG+E+DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++LKAL
Sbjct:   96 RKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.103e-34
Identity = 72/129 (55.81%), Postives = 95/129 (73.64%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 551
            K+  +F VPGAFTPTC+ KHVPGF+ KA EL++KGV  + C+SVND FVM+AW ++      V  L+DG+ +   A+G+ELDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++LKAL
Sbjct:  104 KKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 7.481e-32
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 512
            K+  +FGVPGAF PTCS+ HV GFIEKA+ELKS GV EI+C+S +DPF++ A +    ENK VKF+ DGS +Y   LGLEL++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:   36 KKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.498e-24
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDIL 542
            K+  IFG+PGA+T  CS  HVP +    D+LK+KGV  ++C+SVNDP+ +  WA+      +++F  D    +  +L LE+DLS   LG RS R++  VDD K+KA NVE +  DF VS A+ IL
Sbjct:   71 KKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVIL 195          
BLAST of DY257338 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 9.793e-24
Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  171 KRSSIFGVPGAFTPTCSLKHVPGFIEKADELKSKGVYEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDIL 542
            K+  IFG+PGA+T  CS +HVP +    D+ K+KG+  ++C+SVNDPF +  WA+      +++F  D   K+  +LGL+ DLS   LG RS R++  V+D KVKA NVE    DF V+ A+ IL
Sbjct:   74 KKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
The following BLAST results are available for this feature:
BLAST of DY257338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH2.823e-5581.89Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH1.311e-5277.95Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH2.473e-5176.38Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ3.343e-4873.23Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2E_ARATH1.317e-3660.47Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
PR2E2_ORYSJ1.233e-3458.46Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
PR2E1_ORYSJ2.103e-3455.81Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PRX2A_ARATH7.481e-3261.40Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PRX2F_ORYSJ7.498e-2444.80Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]
PRX2F_ARATH9.793e-2444.00Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257338 ID=DY257338; Name=DY257338; organism=Citrus sinensis; type=EST; length=1294bp
GTACCTACAGGCAAAGGAAAACATAGAAAATAAGGAAAATATCTATTTTT
ACTCGATAACTAAATGTATGGGGTTGTAAAATAGTTATTATATGTCTGAT
TTTACGCTTTTTAACTTGTACGATATTCATCAGGTTTATTATGTGACCAT
ACATTCGCTCGCTGCCGGTAAAAAGGTCATCCATCTTTGGCGTCCCCGGT
GCTTTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAA
GGCTGATGAGTTGAAGTCAAAAGGCGTCTATGAAATTCTCTGCATAAGCG
TTAATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAAC
AAGAGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTT
GGGGCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGA
GGTTTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAA
TCTGGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCT
TTAAATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACT
TCCTTTTGCTGTGCTATGCTTAGGATGAATATAAACCAGTGGATCTCGAA
TATTGTTATGTATGACGCGAGAAGTCTTTTGTTTAAACTGTTGTTCATCT
TTATCGGAATAAAAGGGTGTGTTTTTGTGTCATTACAAAAGAAAACAATA
AAAAAATAATTATTATTTAATTAAAATGTTAGAAGAATCCCCCCCTCTCC
CCCTTTTTTTGGAAACAATTGGAATATTAAGAAAAACTTTTTTTTACTAT
TTTTTTCGCACCAAAAATTGTCTTATTCTCAAAAAAATAAATTTTTTTAT
TTCCCTCAAGCAAAAATTCCCCAAAAGGGGAGGGAATAACAAGCGCCCAC
AATTTTTCCCTGCCCCCTCCCGGCCCTGTGTTTAAAAATTCTTAAAGTTA
TTCTTGTCACACAAAAGAAAATTGTCCCCCAGATTACAAAACCTCTCTCG
ACACAACAAAAAGAAACGGGCACTATTTTTATAAAAATAAGGTATTTTCC
CCCTCCCATTTTTTTGAAAACGCCCTTTTTCTCTTGGGAGAAAAAAGAAA
AAAAAATCCCCCGCACCCATGCGTCCTCTATGAAAAGGGGAAAGATAACA
TATGGTGTCTGCGCGGGGCCTCCTCCCCCCCCCCACCCTCCCACACCAAC
CAACCCCACCTAACCATCACTCACTCTCATATTCTATGTACTAT
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