DY257334

Overview
NameDY257334
Unique NameDY257334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1304
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13480 contig Csv1_Contig13480:1..1248. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DY257334 vs. ExPASy Swiss-Prot
Match: ITPK4_ARATH (Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidopsis thaliana GN=ITPK4 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.922e-57
Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = 3 
Query:  348 PNSGILMTSYERNGLRPILFDSLKSLPIDTENQNSGDSISCTVDLDLELIKDAAKWLAKTLDLTIFGFDVVISEGTGDHVIVDLNYLPSFKEIEKHIAQLAFWDAHKLKFE 680
            P+S  L  S E NGL+PILFDSLKSLP+D+ NQN         ++DLEL+ +AA WL K LDLTIFGFDVVI EGTGDHVIVDLNYLPSFKE+  +IA  AFW+A + +F+
Sbjct:  377 PSSSSLRKSAEENGLKPILFDSLKSLPVDSANQNP------VSEIDLELVTEAATWLRKKLDLTIFGFDVVIQEGTGDHVIVDLNYLPSFKEVPDNIAVPAFWEAIRNRFD 481

HSP 2 Score: 105.916 bits (263), Expect = 1.922e-57
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 1 
Query:   25 CLYLEPLTDVYPGVARLTSHLILLRLRQQKAKGRHASRGAHFLKVIDFKDPGLPQRLAYAQLSLPWIVKPQVACGTADSHRMAIVFGTEDFKYLNVPIPAVVQ 333
            C  ++P+ ++YP V RL    ILL L    A GR   RGA FLK+  + +P L Q L+ A LSLP IVKPQVACG AD+H MAIVF  EDFK LN P+PA++Q
Sbjct:  248 CAIVDPIRNIYPVVDRLKMQHILLGLEGLGAAGRKI-RGACFLKIDSYDEPDLAQNLSRAGLSLPCIVKPQVACGVADAHSMAIVFRVEDFKNLNTPVPAIIQ 349
The following BLAST results are available for this feature:
BLAST of DY257334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ITPK4_ARATH1.922e-5763.06Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AB10FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257334 ID=DY257334; Name=DY257334; organism=Citrus sinensis; type=EST; length=1304bp
TCATTTGAGTTTCATCACTTCCATTGCCTCTATCTTGAGCCACTCACCGA
TGTATACCCTGGAGTGGCACGGCTGACTAGCCATCTGATTCTACTTAGGC
TGCGACAACAAAAAGCTAAGGGACGACATGCAAGTAGGGGCGCCCATTTT
CTTAAGGTTATTGATTTTAAAGATCCTGGCTTGCCACAAAGATTGGCATA
TGCACAACTTTCTCTTCCCTGGATAGTGAAACCTCAAGTTGCATGTGGTA
CGGCTGATTCTCACAGAATGGCAATTGTCTTTGGAACTGAAGATTTTAAA
TATTTGAATGTTCCTATTCCTGCTGTTGTTCAGTTAAGAAGTCTACTCCG
AACTCTGGTATTCTGATGACATCGTATGAAAGGAATGGACTTAGACCTAT
CCTCTTTGACAGCTTAAAATCTCTACCCATCGACACTGAAAATCAAAATT
CAGGAGATTCGATTTCCTGTACGGTTGATCTTGATCTTGAACTGATCAAA
GATGCTGCAAAGTGGCTTGCAAAAACACTTGATCTGACCATCTTTGGATT
TGATGTTGTCATTTCAGAAGGCACTGGTGACCATGTCATTGTAGATTTAA
ACTACCTTCCATCATTCAAGGAAATAGAAAAACACATCGCCCAACTCGCT
TTTTGGGATGCCCATAAACTGAAATTTGAAACAACTAAAGATGCGACAAA
GAACCTATCACTCCCTCATCTTGACCGTCATCCTGCGCTTGTTGGGCGGT
TAACTAACTTTAATGTAAATTCACCGGACCTTGACGAACCCTGGTTTTGC
CTTCAGTACCCGGTTCAACCAACAAATTTGGAGCTCGGTGTTACGAACTA
ATTTTCAAAAATTGCGAATCCCTTCCCCACCCTCCTTAAATTTCTTTCCC
AAATTTTATTTGAAGGAGAATCAAAATATAAAAAAATTTGAAAAACCAAT
AAATAAACAAAAAACAACCCCCACCTCCTCTGTGCCCAACTTCGCTATTT
ATACAAGACACTTGTTTATCCATTAGTTGCCAACGAACAGGGCCCTTCTT
TCAAAAAAAATAAAACCCTCTTTTGTGCCCCCCCACCTTGGAAACTCCCT
TAAGCGGGGAGACTTGAAAATGATGGTCTTCGCCCTCTATCCCTGTGACA
GCCTCTGGGCCCCCCTCGTTCCAACAACCTCGTGCACAACCCAAATTTCA
CGCGGATCACAAAAATAATCCGATTTATTAATACCAATTCTTTATATTAA
TCCACAACCCATCTCCTCCGTCCATTGAACTAGAACAAAAGTCCACGCCT
TACA
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