CN191240

Overview
NameCN191240
Unique NameCN191240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length405
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191240 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 4.083e-12
Identity = 30/103 (29.13%), Postives = 37/103 (35.92%), Query Frame = 1 
Query:   64 GYASH----------HGGPPSSQPYSAQYGAPPTAQPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSSFPPGTDP 342
            GY +H          +GG P    +   YG  P    +   YGAPP    YG+                                  PFASL+PS+FPPGTDP
Sbjct:   99 GYGAHPSSGPSDYGGYGGAPQQSGHGGGYGGAPQQSGHGGGYGAPPPQASYGS----------------------------------PFASLVPSAFPPGTDP 167

HSP 2 Score: 44.2838 bits (103), Expect = 4.083e-12
Identity = 20/25 (80.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  329 PERIPNIVACFQLADRDNSGLIDDK 403
            P   PNIVACFQ ADRDNSG IDDK
Sbjct:  163 PGTDPNIVACFQAADRDNSGFIDDK 187
The following BLAST results are available for this feature:
BLAST of CN191240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CML49_ARATH4.083e-1229.13Probable calcium-binding protein CML49 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0004N04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191240 ID=CN191240; Name=CN191240; organism=Citrus sinensis; type=EST; length=405bp
TCCGGCTATCCCCAACCTCCGCCCGGCTACGGCTACGGCTCCGCACAGCC
TCCGAGTTCTCAGGGCTACGCTTCCCATCACGGCGGGCCGCCGAGTTCTC
AGCCCTACTCTGCTCAGTACGGCGCGCCGCCGACGGCTCAGCCCTACTCT
GCTCAGTACGGCGCACCGCCGACGGCTCAGCCCTACGGGGCACGGCCACA
CGCGGCTCCGTCCGCACCCTCTTACGGCGGGCCTTCTCCGGCTCCTGCTT
CTGCTCCAGGCGGCTATCCGCCGGCTCCGGGATCGTACGGTAATCCGTTT
GCATCTCTAATGCCGTCCAGTTTCCCTCCCGGAACGGATCCCGAACATCG
TGGCGTGCTTCCAGTTGGCCGACCGGGACAACAGCGGCCTCATCGACGAT
AAGGA
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