GO242681

Overview
NameGO242681
Unique NameGO242681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242681 vs. ExPASy Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.852e-25
Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 1
Query:  127 EQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 318
            EQLE+KKAEY EKMKNK+AL+HKEAEEKRAM+EA+RGED+LKAEE+AAKYRATGT PKK+LG F
Sbjct:  135 EQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198          
BLAST of GO242681 vs. ExPASy Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23
Identity = 51/64 (79.69%), Postives = 57/64 (89.06%), Query Frame = 1
Query:  127 EQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 318
            EQLE+KKAEYAE+MKNKVA +HKEAEE+RAM+EA+RGEDVLKAEE AAKYRATG  PK   GCF
Sbjct:  149 EQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212          
BLAST of GO242681 vs. ExPASy Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.337e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 1
Query:  127 EQLERKKAEYAEKMKNKVALVHKEAEEKRAMVEARRGEDVLKAEEIAAKYRATGTTPKKLLGCF 318
            E+LE+KKA+Y EKMKNKVA +HK AEEKRAMVEA++GE++LKAEE+ AKYRATG  PK   GCF
Sbjct:  127 EKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190          
The following BLAST results are available for this feature:
BLAST of GO242681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
REMO_SOLTU6.852e-2582.81Remorin OS=Solanum tuberosum PE=1 SV=1[more]
Y3126_ARATH2.879e-2379.69Uncharacterized protein At3g61260 OS=Arabidopsis t... [more]
REMO_ARATH1.337e-2071.88Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1[more]
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Properties
Property NameValue
Genbank description1329 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1520 5, mRNA sequence.