GO242635

Overview
NameGO242635
Unique NameGO242635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242635 vs. ExPASy Swiss-Prot
Match: XYLT_ARATH (Beta-(1,2)-xylosyltransferase OS=Arabidopsis thaliana GN=XYLT PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.453e-77
Identity = 144/207 (69.57%), Postives = 170/207 (82.13%), Query Frame = 2
Query:    2 GDVDCHGATAHDLWQNPDDKKTARLSEFGEMIRAAFGLQVNRHRT-EKP-------GSGHNVLFVRREDYLAHPRHGGKVESRLSNEQEVFDSLQSW----ASNYLDCKINLVNGLFAHMTMKEQVRAIQDASVIIGAHGAGLTHIVSATAKTVILEIVSSQFRRPHFEYISKWKGLEYHAIYLDGSYAKPTDVIDKLSHIIRNLGC 586
            G++DC G +AH+LWQNPDDK+TAR+SEFGEMIRAAFGL VNRHR+ EKP        S +NVLFVRREDYLAHPRHGGKV+SRL NE+EVFDSL  W    ++    C INLVNGL AHM+MK+QVRAIQDASVIIGAHGAGLTHIVSAT  T I EI+S +F+RPHFE I+KWKGLEYHA++L  S A+PT VI+KL+ I+++LGC
Sbjct:  328 GEIDCKGDSAHNLWQNPDDKRTARISEFGEMIRAAFGLPVNRHRSLEKPLSSSSSSASVYNVLFVRREDYLAHPRHGGKVQSRLINEEEVFDSLHHWVATGSTGLTKCGINLVNGLLAHMSMKDQVRAIQDASVIIGAHGAGLTHIVSATPNTTIFEIISVEFQRPHFELIAKWKGLEYHAMHLANSRAEPTAVIEKLTEIMKSLGC 534          
The following BLAST results are available for this feature:
BLAST of GO242635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
XYLT_ARATH3.453e-7769.57Beta-(1,2)-xylosyltransferase OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank description1283 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1473 5, mRNA sequence.