GO242573

Overview
NameGO242573
Unique NameGO242573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242573 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14
Identity = 33/44 (75.00%), Postives = 42/44 (95.45%), Query Frame = 1
Query:    4 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 135
            TVV NLEPAG+DLL+ MLC+DP++RITARSA+EHEYF+D++FVP
Sbjct:  248 TVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP 291          
BLAST of GO242573 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.550e-14
Identity = 34/43 (79.07%), Postives = 41/43 (95.35%), Query Frame = 1
Query:    7 VVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 135
            VV NL+PAGIDLL+KMLC+DPS+RITAR+ALEHEYF+D+ FVP
Sbjct:  252 VVPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYFKDIGFVP 294          
BLAST of GO242573 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 1
Query:    4 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 135
            TVV NL+ AG++LLS MLC+DPS+RITAR A+EHEYF+D++FVP
Sbjct:  251 TVVPNLDAAGLNLLSSMLCLDPSKRITARIAVEHEYFKDIKFVP 294          
BLAST of GO242573 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.507e-11
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 1
Query:    4 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFV 132
            TVV NL+PAG+DLLSKML  +PS+RITAR ALEHEYF+D+E V
Sbjct:  251 TVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVV 293          
BLAST of GO242573 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.507e-11
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query:    4 TVVRNLEPAGIDLLSKMLCMDPSRRITARSALEHEYFRDVEFVP 135
            T V NLEPAG+DLLS    +DP+RRITAR ALEHEYF+D++FVP
Sbjct:  251 TQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYFKDIKFVP 294          
The following BLAST results are available for this feature:
BLAST of GO242573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CDC21_MEDSA5.780e-1475.00Cell division control protein 2 homolog 1 (Fragmen... [more]
CDC2_CHERU7.550e-1479.07Cell division control protein 2 homolog OS=Chenopo... [more]
CDC2_VIGAC4.143e-1270.45Cell division control protein 2 homolog OS=Vigna a... [more]
CDC2_MAIZE3.507e-1174.42Cell division control protein 2 homolog OS=Zea may... [more]
CDC22_MEDSA3.507e-1170.45Cell division control protein 2 homolog 2 OS=Medic... [more]
back to top
Properties
Property NameValue
Genbank description1221 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1398 5, mRNA sequence.