GO242338

Overview
NameGO242338
Unique NameGO242338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242338 vs. ExPASy Swiss-Prot
Match: TOM7A_ARATH (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 3
Query:    3 EEKSMIDSFKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 158
            ++KS  D  KEW+ W++KKAKVVTHYGFIPL+I +GMNSDPKP ++QLLSPV
Sbjct:   24 DDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLLSPV 75          
BLAST of GO242338 vs. ExPASy Swiss-Prot
Match: TOM7A_SOLTU (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 3
Query:   30 KEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 158
            KEW TWT KKAKV+THYGFIPL+IIIGMNS+PKP + QLLSPV
Sbjct:   30 KEWGTWTAKKAKVITHYGFIPLVIIIGMNSEPKPSLSQLLSPV 72          
BLAST of GO242338 vs. ExPASy Swiss-Prot
Match: TOM7B_ARATH (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.553e-15
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 3
Query:   27 FKEWSTWTMKKAKVVTHYGFIPLIIIIGMNSDPKPQVYQLLSPV 158
            FK+W+ W+++KAKV THYGFIPLIIIIGMNSDPKP ++ LLSPV
Sbjct:   34 FKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSPV 77          
The following BLAST results are available for this feature:
BLAST of GO242338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TOM7A_ARATH4.105e-1769.23Mitochondrial import receptor subunit TOM7-1 OS=Ar... [more]
TOM7A_SOLTU2.252e-1581.40Mitochondrial import receptor subunit TOM7-1 OS=So... [more]
TOM7B_ARATH6.553e-1575.00Mitochondrial import receptor subunit TOM7-2 OS=Ar... [more]
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Properties
Property NameValue
Genbank description986 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1139 5, mRNA sequence.