GO242337

Overview
NameGO242337
Unique NameGO242337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVKKN 129
            GSVNGANCKEL  QP VDGFLVGGASLKPEFIDIIK+A VK+N
Sbjct:  211 GSVNGANCKELGGQPDVDGFLVGGASLKPEFIDIIKAAEVKRN 253          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVK 123
            GSV GANCKELAA+P VDGFLVGGASLKPEFIDII SATVK
Sbjct:  211 GSVTGANCKELAAKPDVDGFLVGGASLKPEFIDIINSATVK 251          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVKKN 129
            GSVNGAN KELA QP +DGFLVGGASLKPEF+DIIKSATVK +
Sbjct:  211 GSVNGANSKELAGQPDIDGFLVGGASLKPEFVDIIKSATVKSS 253          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVK 123
            GSV GA+CKELAAQP VDGFLVGGASLKPEFIDII +ATVK
Sbjct:  211 GSVTGASCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVK 123
            GSV  ANCKELAAQP VDGFLVGGASLKPEFIDII +ATVK
Sbjct:  211 GSVTAANCKELAAQPDVDGFLVGGASLKPEFIDIINAATVK 251          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.039e-12
Identity = 35/43 (81.40%), Postives = 37/43 (86.05%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVKKN 129
            GSVNG NCKEL  Q  VDGFLVGGASLKPEFIDIIK+A VKK+
Sbjct:  211 GSVNGGNCKELGGQADVDGFLVGGASLKPEFIDIIKAAEVKKS 253          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVKKN 129
            GSV+G+NCKEL  Q  VDGFLVGGASLKPEFIDIIK+A VKK+
Sbjct:  152 GSVSGSNCKELGGQTDVDGFLVGGASLKPEFIDIIKAAEVKKS 194          
BLAST of GO242337 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.149e-11
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 1
Query:    1 GSVNGANCKELAAQPGVDGFLVGGASLKPEFIDIIKSATVK 123
            GSV GA+CKELAAQ  VDGFLVGGASLKPEFIDII +A VK
Sbjct:  211 GSVTGASCKELAAQADVDGFLVGGASLKPEFIDIINAAAVK 251          
The following BLAST results are available for this feature:
BLAST of GO242337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TPIS_PETHY2.473e-1486.05Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_ORYSJ1.227e-1390.24Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_COPJA1.227e-1383.72Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_SECCE3.571e-1387.80Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_MAIZE4.664e-1387.80Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH1.039e-1281.40Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_LACSA3.023e-1279.07Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_HORVU1.149e-1182.93Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
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Properties
Property NameValue
Genbank description985 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1137 5, mRNA sequence.