GO242323

Overview
NameGO242323
Unique NameGO242323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.399e-69
Identity = 123/133 (92.48%), Postives = 131/133 (98.50%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            +FDGAKAYKDSKVCNMLTMQEFHRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVS+PSLTKSGVYWSWNK+SASFENQLS+EASD EKARKVWE+SEKLVGLA
Sbjct:  263 EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSEEASDTEKARKVWELSEKLVGLA 395          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.745e-69
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            +FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVS+PSLTKSGVYWSWNKDSASFENQLS+EASDVEKARKVWE+SEKLVGLA
Sbjct:  266 EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEAESGKRLAQVVSEPSLTKSGVYWSWNKDSASFENQLSEEASDVEKARKVWEVSEKLVGLA 398          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.800e-69
Identity = 124/133 (93.23%), Postives = 128/133 (96.24%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            DFDGAKAYKDSKVCNMLTMQEFHRR+HEETGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE+E+GKRLAQVVSDPSLTKSGVYWSWN  SASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  267 DFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSEEESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSQEASDAEKARKVWEVSEKLVGLA 399          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.672e-68
Identity = 122/133 (91.73%), Postives = 131/133 (98.50%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            +FDGAKAYKDSKVCNMLTMQEFH+R+HEETGI FASLYPGCIATTGLFREHIPLFR+LFPPFQK+IT+GYVSEDEAGKRLAQVVS+PSLTKSGVYWSWNK+SASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  266 EFDGAKAYKDSKVCNMLTMQEFHKRYHEETGITFASLYPGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDEAGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSQEASDAEKARKVWELSEKLVGLA 398          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 2.183e-68
Identity = 124/133 (93.23%), Postives = 128/133 (96.24%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            DFDGAKAYKDSKVCNMLTMQEFHRRFHEETG+ FASLYPGCIA+TGLFREHIPLFR LFPPFQKYITKGYVSE E+GKRLAQVVSDPSLTKSGVYWSWN  SASFENQLS+EASDVEKARKVWEISEKLVGLA
Sbjct:  269 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGVTFASLYPGCIASTGLFREHIPLFRALFPPFQKYITKGYVSETESGKRLAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 2.851e-68
Identity = 124/133 (93.23%), Postives = 128/133 (96.24%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            DF GAKAYKDSKVCNMLTMQEFHRRFHE+TGI FASLYPGCIATTGLFREHIPLFR LFPPFQKYITKGYVSE EAGKRLAQVV+DPSLTKSGVYWSWNK SASFENQLSQEASDVEKAR+VWE+SEKLVGLA
Sbjct:  273 DFVGAKAYKDSKVCNMLTMQEFHRRFHEDTGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGYVSESEAGKRLAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.848e-67
Identity = 120/133 (90.23%), Postives = 129/133 (96.99%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            +FDGAKAYKDSKVCNMLTMQEFHRR+H ETG+ FASLYPGCIATTGLFREH+PLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVSDPSLTKSGVYWSWN +SASFENQLS+EASD EKA+KVWE+SEKLVGLA
Sbjct:  266 EFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFASLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLA 398          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORA_WHEAT (Protochlorophyllide reductase A, chloroplastic OS=Triticum aestivum GN=PORA PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.565e-66
Identity = 119/132 (90.15%), Postives = 128/132 (96.97%), Query Frame = 3
Query:    6 FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            FDGAKAYKDSKVCNMLTMQEFHRR+HEETGI F+SLYPGCIATTGLFREHIPLFR LFPPFQK++TKG+VSE E+GKRLAQVV++PSLTKSGVYWSWNKDSASFENQLSQEASD EKARKVWE+SEKLVGLA
Sbjct:  257 FDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFSSLYPGCIATTGLFREHIPLFRTLFPPFQKFVTKGFVSEAESGKRLAQVVAEPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKVWELSEKLVGLA 388          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORA_ORYSJ (Protochlorophyllide reductase A, chloroplastic OS=Oryza sativa subsp. japonica GN=PORA PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.565e-66
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 3
Query:    6 FDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGL 398
            FDGAKAYKDSK+CNMLTMQEFHRRFHEETGI FASLYPGCIATTGLFREHIPLFRLLFPPFQ+++TKG+VSE E+GKRLAQVV DPSLTKSGVYWSWNKDSASFENQLSQEASD EKARK+W++SEKLVGL
Sbjct:  256 FDGAKAYKDSKICNMLTMQEFHRRFHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQRFVTKGFVSEAESGKRLAQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDPEKARKLWDLSEKLVGL 386          
BLAST of GO242323 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.043e-66
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 3
Query:    3 DFDGAKAYKDSKVCNMLTMQEFHRRFHEETGIAFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSQEASDVEKARKVWEISEKLVGLA 401
            +FDGAKAYKDSKVCNMLTMQE HRR+HEETG+ FASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSE+EAGKRLAQVVSDPSL KSGVYWSWN +S+SFENQLS+EASD EKA+K+WE+SEKLVGLA
Sbjct:  269 EFDGAKAYKDSKVCNMLTMQELHRRYHEETGVTFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401          
The following BLAST results are available for this feature:
BLAST of GO242323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PORB_HORVU4.399e-6992.48Protochlorophyllide reductase B, chloroplastic OS=... [more]
POR_DAUCA5.745e-6993.23Protochlorophyllide reductase, chloroplastic OS=Da... [more]
POR_PEA9.800e-6993.23Protochlorophyllide reductase, chloroplastic OS=Pi... [more]
PORA_CUCSA1.672e-6891.73Protochlorophyllide reductase, chloroplastic OS=Cu... [more]
PORB_ARATH2.183e-6893.23Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_ARATH2.851e-6893.23Protochlorophyllide reductase A, chloroplastic OS=... [more]
PORB_ORYSJ1.848e-6790.23Protochlorophyllide reductase B, chloroplastic OS=... [more]
PORA_WHEAT1.565e-6690.15Protochlorophyllide reductase A, chloroplastic OS=... [more]
PORA_ORYSJ1.565e-6690.08Protochlorophyllide reductase A, chloroplastic OS=... [more]
PORC_ARATH2.043e-6688.72Protochlorophyllide reductase C, chloroplastic OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank description971 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1122 5, mRNA sequence.