GO242304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_PONAB (Pre-rRNA-processing protein TSR1 homolog OS=Pongo abelii GN=TSR1 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 6.131e-30 Identity = 72/145 (49.66%), Postives = 89/145 (61.38%), Query Frame = 2 Query: 11 IKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 ++K K+ E E FPDEVDTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F + E E + YV LH+ EVP + C + +PLIA LL HE KMSVL+ V++ P+ Sbjct: 473 LEKYKQERLE-EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGCYVTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPV 609
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_HUMAN (Pre-rRNA-processing protein TSR1 homolog OS=Homo sapiens GN=TSR1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 8.007e-30 Identity = 72/145 (49.66%), Postives = 89/145 (61.38%), Query Frame = 2 Query: 11 IKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 ++K K+ E E FPDEVDTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F FT T+K +F + E E + YV LH+ EVP + C + +PLIA LL HE KMSVL+ V++ P+ Sbjct: 472 LEKYKQERLE-EMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAE----VGWYVTLHVSEVPVSVVE--C-FRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPV 608
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_XENLA (Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.510e-28 Identity = 68/148 (45.95%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 2 EDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 E+++ + + +DE FPDEVDTP D AR RF KYRGLKSFRTS WD KE+LP +YARIF F F RT+K VF E+E D+ YV +HI VP + PL+ LL HE KMSV++ V++H + PI Sbjct: 480 EEQMLEKYKLQRQDEVFPDEVDTPRDQIARIRFQKYRGLKSFRTSPWDVKENLPRDYARIFQFHDFFRTRKRVF-----KEEEEKDEGAMVGWYVTVHISAVPVSVME---HFKHGLPLVLCSLLPHEQKMSVMNMLVRRHPGNNEPI 619
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_MOUSE (Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus GN=Tsr1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.364e-28 Identity = 68/150 (45.33%), Postives = 90/150 (60.00%), Query Frame = 2 Query: 2 EDEIKKIKEAHAE--DEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 EDE + +++ E +E FPDE+DTP DV AR RF KYRGLKSFRTS WDPKE+LP +YARIF F F T+K +F + E E + YV LH+ +VP + + +PLIA LL +E KMSVL+ V ++ P+ Sbjct: 465 EDEERMLEKYKQERLEEMFPDEMDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQNFVNTRKRIFKEIEEKEAEGAE----VGWYVTLHVSDVPVSVVE---YFRQGAPLIAFSLLPYEQKMSVLNMVVSRNPGNTEPV 607
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_DICDI (Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium discoideum GN=tsr1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.371e-26 Identity = 62/150 (41.33%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 2 EDEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPA--SLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 EDE K++++ ++ +PDEVDTP +VP+R RF+K+RGLKSFR+S WD KE+LP +YA+IF F F ++ + A + D+ PA +YVR+H+ P + R P +A GL ++E+K+S+LHFSV+KH +Y+ + Sbjct: 509 EDERKQLQQ---DEILYPDEVDTPGNVPSRIRFSKFRGLKSFRSSPWDVKENLPIDYAKIFQFHSFNQSMRASIA---------ILDNAPAKPDMYVRIHLVNGPKQLVERNTTAITTKPEVAVGLYRYENKISLLHFSVEKHKSYEETV 646
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_DROME (Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster GN=CG7338 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.938e-25 Identity = 59/147 (40.14%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 5 DEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 + +KK+++A D+ +PDE+DTPLDVPAR+RF KYRGL+SFRTS WD KE+LP +YARI+ F F RT++ + A + E V LYV L++ VP + +I G+L HE +M V++ +++ + P+ Sbjct: 475 ETLKKLQQART-DQLWPDEIDTPLDVPARERFQKYRGLESFRTSPWDAKENLPADYARIYQFQNFDRTKRRILNEAKEFE------GVLPGLYVTLYVINVPESRWNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMPDSEVPL 614
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_CAEEL (Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis elegans GN=tag-151 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.938e-25 Identity = 62/148 (41.89%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 8 EIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFA--NALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 E++K ++ E+ ++PDEVDTP+D+PAR F KYRGLKSFRTS+WDPKE+LP +YARIF F + T+K+V + ++ +++ D + + I+ VP + L + L+ LL HE KMSVL+ +KKH + PI Sbjct: 438 EVEKYRKER-ENAQWPDEVDTPMDMPARIAFQKYRGLKSFRTSTWDPKENLPLDYARIFQFANYRNTKKNVMSKIGGNDVDADSVADKKFNGAFASVFIENVPVAV---LEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPI 581
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_CAEBR (Pre-rRNA-processing protein TSR1 homolog OS=Caenorhabditis briggsae GN=tag-151 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.323e-24 Identity = 62/149 (41.61%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 8 EIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKESLPPEYARIFAFDKFTRTQKHVFANALKMEQENMD---DSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 E++K ++ E+ ++PDEVDTP+D PAR RF KYRGLKSFRTS+WD KE+LP +YARIF F + T+K+V + + + D D ++ ++I+ VP + E L+ LL HE KMS+L+ +KKH + PI Sbjct: 441 EVEKYRKER-ENAQWPDEVDTPIDQPARIRFQKYRGLKSFRTSTWDAKENLPVDYARIFQFANYKNTKKNVMSKIGGNDVDAGDAVIDKKFNGVFASVYIENVPVSVME---AYKETKNLVLFQLLPHEQKMSILNMVLKKHPSCTVPI 585
BLAST of GO242304 vs. ExPASy Swiss-Prot
Match: TSR1_SCHPO (Ribosome biogenesis protein tsr1 homolog OS=Schizosaccharomyces pombe GN=SPAC23H4.15 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12 Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 5 DEIKKIKEAHAEDEEFPDEVDTPLDVPARKRFAKYRGLKSFRTSSWDPKE---SLPPEYARIFAFDKFTRTQKHVFANALKMEQENMDDSVPASLYVRLHIKEVPAGIAHRLCEIAERSPLIASGLLQHESKMSVLHFSVKKHDTYDAPI 445 +E +K ++ E+ EFPDEV+ + AR+RF KYRGL+S TS WD E + P E+ ++F F+ + R K+ F ++Q + ++ P V + ++ VP I + + L+ LLQ+E+K++V F+ +H Y+ PI Sbjct: 459 EEYRKKQKELQEELEFPDEVELQPNELARERFKKYRGLRSLYTSQWDADEYDPNEPREWRQLFKFENY-RNLKNKF-----LKQPFIGEAKPGKA-VYVELRNVPIEIFEYYNK--PWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPI 599 The following BLAST results are available for this feature:
BLAST of GO242304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
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