GO242271

Overview
NameGO242271
Unique NameGO242271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242271 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.567e-77
Identity = 142/216 (65.74%), Postives = 172/216 (79.63%), Query Frame = 1
Query:    1 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKH 648
            EG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQK+ E+ S+ L+G+P+   +T     L+PLGEAC R DLTAIHEI+EK+GYKDDEG   ELSFQMWTDQ+Q+TL  KK+GD+AFR KDF  AIECY+ FI+ GTM SPTV AR+ LCYL++DMP+EAL +AMQAQVISP W  A YLQA AL  LG  N+A   LKDG  LE+K++
Sbjct:  274 EGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485          
BLAST of GO242271 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.051e-70
Identity = 133/219 (60.73%), Postives = 162/219 (73.97%), Query Frame = 1
Query:    1 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIP--HGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKKHR 651
            EG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI       ST Q   L+PLGEACSR+DLTAIH+IL    Y+DDEG  NELSFQ WT Q+++ L+++KRGD +FR KDF TAI+CY+ FID GTMVSPTVF RR LCYLL D P  AL DAMQAQ + PDWPTAFY+Q+ AL  L MN DA + L +   LE K+ R
Sbjct:  291 EGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQR 507          
BLAST of GO242271 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.929e-51
Identity = 101/215 (46.98%), Postives = 141/215 (65.58%), Query Frame = 1
Query:    1 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAKDFPTAIECYTHFIDGGTMVSPTVFARRCLCYLLSDMPQEALGDAMQAQVISPDWPTAFYLQAAALFGLGMNNDAQETLKDGTNLEAKK 645
            +G FS D+   + +LAS+CL+YE +E PN K +VA+L  LQ   E PSY ++ + +       +  L+PLGEAC R+DL +IH IL   GY DD+ I  ELSF+ W  +++E  + ++ GD AF  +DF TAI CY+ F++  ++V P+V+ARR L YL  D P++AL D M AQ + PDWPTAFYLQ+ AL  L MN D+ +TLK+   LE KK
Sbjct:  252 KGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465          
The following BLAST results are available for this feature:
BLAST of GO242271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y5126_ARATH1.567e-7765.74Probable serine/threonine-protein kinase At5g41260... [more]
Y4523_ARATH7.051e-7060.73Probable serine/threonine-protein kinase At4g35230... [more]
SSP_ARATH1.929e-5146.98Probable inactive receptor-like kinase SSP OS=Arab... [more]
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Properties
Property NameValue
Genbank description919 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1070 5, mRNA sequence.