GO242256

Overview
NameGO242256
Unique NameGO242256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.265e-60
Identity = 106/198 (53.54%), Postives = 142/198 (71.72%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H NIV+FI AC+K  V+CI+TEY   G++R +L +++  ++ ++  ++ ALD++RGM Y+H  G IHRDLKS+NLL++ +  +K+ADFG + +E Q        GTYRWMAPEMI+ +PYT+KVDVYSFGIVLWEL T LLPFQ MT VQAAFAV  K  RP +P  C P L+ ++ RCW  NP  RP F+ IV +LE
Sbjct:  144 HPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIVAVLE 341          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.149e-41
Identity = 85/197 (43.15%), Postives = 125/197 (63.45%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 592
            H NIV  + AC      C +TEY  GGS+   L  ++ + + ++L  K A+ +A+GM Y+H  G IHRD+KS NLL+    ++KI DFG+++++ ++  MT   G+  WM+PE++    YT+KVDVY+FGI+LWEL TG LP+  + +VQ A AV  K +RP IPN     LS ++  CW  +P  RP FTEI+ +L
Sbjct:  717 HPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSKKIK-MNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKICDFGLSKLKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLL 912          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.337e-38
Identity = 85/206 (41.26%), Postives = 124/206 (60.19%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLK----LAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTY---RWMAPEMIQHRP-YTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLE 595
            H NIV FIGAC K    CI+TEY  GGS+   L    +    +K    L +K A D+A G+ ++H +  +HRDL S N+L+    +IKI+DFG++R + +   MT   G     RW  PE+ ++   Y++KVDVY F +V+WE++TG +PF ++   QA+  V   G+RP IP  C P L  ++T+CW+ +P  RPPFT IV  L+
Sbjct:  907 HQNIVMFIGACYKPA--CIITEYMAGGSLYNILHNPNSSTPKVKYSFPLVLKMATDMALGLLHLHSITIVHRDLTSQNILLDELGNIKISDFGLSREKSREGSMTMTNGGICNPRWRPPELTKNLGHYSEKVDVYCFSLVVWEILTGEIPFSDLDGSQASAQVAYAGLRPPIPEYCDPELKLLLTQCWEADPNDRPPFTYIVNKLK 1110          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.648e-37
Identity = 79/206 (38.35%), Postives = 127/206 (61.65%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH---GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETE 610
            H NI++F G   +   + IVTEYA  GS+  ++   ++  + ++  +  A DVA+GM Y+H    +  IHRDLKS N++I+AD  +KI DFG +R    T  M+   GT+ WMAPE+IQ  P ++  D YS+G+VLWE++T  +PF+ +  +Q A+ VV K  R  IP+ C    +E++ +CW+ + + RP F +I+ +LE+   +
Sbjct:   62 HRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSND 266          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.152e-37
Identity = 83/225 (36.89%), Postives = 132/225 (58.67%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVH---GLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVR-------KARFRC 646
            H NI++F G   +   + IVTEYA  GS+  ++   ++  + +   +  A DVA+GM Y+H    +  IHRDLKS N++I+AD  +KI DFG +R    T  M+   GT+ WMAPE+IQ  P ++  D YS+G+VLWE++T  +PF+ +  +Q A+ VV K  R  IP+ C    +E++ +CW+ + + RP F +I+ +LE+   +     +       KA +RC
Sbjct:   62 HRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMDHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSL-VGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMSNDTSLPDKCNSFLHNKAEWRC 285          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.179e-37
Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETE 610
            H NIV F+GAC +    CIVTEY   GS+   L   ++  +   L ++   D ARGM Y+H      IHRDLK+DNLL+     +K+ADFG+A ++  T   T   GT  W+APE++    YT+K DVYS+ IVLWEL+T L+P+     +Q   + +++G R  +P  C P  + +M RCW+T+P  RP F EI+ ++E   +E
Sbjct:  905 HPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLD-ESIEMDWGLRLQLGFDCARGMTYLHSRNPIIIHRDLKTDNLLVDDSWQVKVADFGLATVKSHTFAKTM-CGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRS-IDRGERLPMPAWCPPKYAALMNRCWETDPTHRPSFPEILPIMEGMISE 1106          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.924e-36
Identity = 74/214 (34.58%), Postives = 126/214 (58.88%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 643
            H NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW++ P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  203 HPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFK 414          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.924e-36
Identity = 74/214 (34.58%), Postives = 126/214 (58.88%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 643
            H NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW++ P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  170 HPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNSKPRNRPSFRQILLHLDIASADVLSTPQETYFK 381          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.181e-35
Identity = 74/214 (34.58%), Postives = 125/214 (58.41%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKARFR 643
            H NI+ F G C +   +CI+ E+   G + + L  R  R V   L V  ++ +A GM Y+H    IHRDLKS N+LI+ D  +KI+DFG ++            GT  WMAPE+I++ P ++KVD++SFG+VLWEL+TG +P++++ +    + V +  +   +P+ C      ++ +CW+  P  RP F +I+  L+ A  ++++T ++  F+
Sbjct:  203 HPNIITFKGVCTQAPCYCILMEFCAQGQLYEVL--RAGRPVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNRKPRNRPSFRQILLHLDIASADVLSTPQETYFK 414          
BLAST of GO242256 vs. ExPASy Swiss-Prot
Match: Y9957_DICDI (Probable serine/threonine-protein kinase DDB_G0276181 OS=Dictyostelium discoideum GN=DDB_G0276181 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.543e-35
Identity = 84/233 (36.05%), Postives = 125/233 (53.65%), Query Frame = 2
Query:    2 HLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLIS-----ADKSIKIADFG--VARIEVQTEGMTPETG--------------TYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVQAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRMLENAETEIMTTVRKAR 637
            H N+V+++G C K   W IV EY  GG++   L       +P KL ++ ALD+A+G+ Y+H LG +H D+KS NLL+S     A  +IK+ADF   + R  +        TG              T  WMAPE+I+   Y++K DVYSF I++WE++T  LP+ ++         V KG+RP IP  C    +++M +CWD +PE RP F  I+  +         T +KA+
Sbjct: 1089 HPNVVKYVGGCTKIANWSIVMEYVPGGNLMDVLANPV-LVIPYKLVLRMALDIAKGLHYLHSLGILHLDMKSPNLLVSSLSTSAKVNIKVADFNTCINRSRITAGFFNRHTGSGDNNKVEKDSKKGTTLWMAPEVIRGAMYSEKCDVYSFAIIMWEMVTRKLPYSHIAFNCEVEDQVLKGLRPPIPMHCNKNYTDLMEQCWDDDPENRPYFDTIIHSISKMIESNDITEQKAK 1320          
The following BLAST results are available for this feature:
BLAST of GO242256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HT1_ARATH5.265e-6053.54Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI7.149e-4143.15Probable serine/threonine-protein kinase DDB_G0267... [more]
PYK2_DICDI4.337e-3841.26Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
MLTK_MOUSE1.648e-3738.35Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN2.152e-3736.89Mitogen-activated protein kinase kinase kinase MLT... [more]
DRKD_DICDI8.179e-3740.98Probable serine/threonine-protein kinase drkD OS=D... [more]
M3K12_MOUSE6.924e-3634.58Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN6.924e-3634.58Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_RAT1.181e-3534.58Mitogen-activated protein kinase kinase kinase 12 ... [more]
Y9957_DICDI1.543e-3536.05Probable serine/threonine-protein kinase DDB_G0276... [more]

Pages

back to top
Properties
Property NameValue
Genbank description904 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 1055 5, mRNA sequence.