GO242251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 2.397e-35 Identity = 99/246 (40.24%), Postives = 132/246 (53.66%), Query Frame = 1 Query: 13 CLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGKPSQQMSVPVPD*STDDAAQNSDLAA*SDDGT 747 CL D+D A +GGTT V MV ++ V P + ++ C LYAPLI DG EKFYWA TREDR G CKG D I + D V SI ++A +++ + L V I LV + P F+ P+MT EKL+EYG+M+ E+ N + VQLA YLS+AALG+++ADA G+FYGK +QQ+++PVP+ TD A+N D A SDDGT Sbjct: 224 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGT 469
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 3.130e-35 Identity = 97/248 (39.11%), Postives = 133/248 (53.63%), Query Frame = 1 Query: 13 CLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGKPSQQMSVPVPD*STDDAAQNSDLAA*SDDGTLL 753 CL D+D A +GGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TR+DR G CKG D + + K V SI ++A +++ + + I LV + +F+ PKMT+EKLLEYGHM+ QE+ N + VQLA Y+S+AALG+++ DA +GSFYGK +QQ ++PVP+ TD A+N D A SDDG+ L Sbjct: 214 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCL 461
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 5.339e-35 Identity = 100/249 (40.16%), Postives = 138/249 (55.42%), Query Frame = 1 Query: 13 CLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGKPSQQM-SVPVPD*STDDAAQNSDLAA*SDDGTLL 753 CL D+D A +GGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TR+DR G CKG D + + D K V + SI ++A +++ +S V I LV + P F+ PKMT+EKL+EYG+M+ +E+ N + VQLA QYLSEAALG++++DA +GSFYG+ +QQ ++PVP+ TD A+N D A SDDG+ L Sbjct: 215 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCL 463
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.595e-35 Identity = 78/180 (43.33%), Postives = 108/180 (60.00%), Query Frame = 1 Query: 208 LYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGKPSQQMSVPVPD*STDDAAQNSDLAA*SDDGT 747 LYAPLI DG EKFYWA TREDR G C G D + K V A SI ++A ++ ++ + V + LV + P F+ P+MT++KL+EYG+M+ QE+ N + VQLA QY+S AALG+++ DA G+F+GK +QQ+S+PV TD A+N D A SDDG+ Sbjct: 288 LYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGS 467 HSP 2 Score: 34.6538 bits (78), Expect = 5.595e-35 Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 2 Query: 116 DAPFW*QLPDSCNKKDNRGVPLLATGNDF 202 D P QLP NK+DN VP++ TGNDF Sbjct: 257 DNPTNVQLPGMYNKQDNARVPIIVTGNDF 285
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.527e-33 Identity = 98/248 (39.52%), Postives = 131/248 (52.82%), Query Frame = 1 Query: 13 CLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGKPSQQM--SVPVPD*STDDAAQNSDLAA*SDDGT 747 CL D+D A +GGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TREDR G CKG D + ++D K V SI ++A ++ +S + V I LV + PSF+ PKMT++KLL YG M+ QE+ N + VQLA +Y+SEAALG+++ DA G+FYG + Q +VPVP+ TD A N D A SDDG+ Sbjct: 224 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGS 471
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.795e-29 Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 208 LYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFY 648 LYAPLI DG EKFYWA TR+DR G CKG D + E D K V SI ++A +++ +SG+ V LV + P+FD PKM+++KLL+YG+M+ QE+ N + VQLA +YL+EAALG ++ DA SGSF+ Sbjct: 292 LYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438 HSP 2 Score: 33.113 bits (74), Expect = 1.795e-29 Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 2 Query: 116 DAPFW*QLPDSCNKKDNRGVPLLATGNDF 202 D P QLP NK++N VP++ TGNDF Sbjct: 261 DNPTNVQLPGMYNKEENARVPIIVTGNDF 289
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.795e-29 Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 208 LYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFY 648 LYAPLI DG EKFYWA TREDR G CKG D + E D + V SI ++A +++ +SG+ V + LV + P+FD PKMT++KLL Y M+ QE+ N + VQLA QYL+EAALG ++ DA SGSF+ Sbjct: 294 LYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440 HSP 2 Score: 34.6538 bits (78), Expect = 1.795e-29 Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 2 Query: 116 DAPFW*QLPDSCNKKDNRGVPLLATGNDF 202 D P QLP NK+DN VP++ TGNDF Sbjct: 263 DNPTNVQLPGMYNKEDNARVPIIVTGNDF 291
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.274e-28 Identity = 86/217 (39.63%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 7 RSCLLF*-DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYG 651 + C LF D+D A LGGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TREDR G C G +D + + D K V SI ++A +++ ++G+ V I LV + P+F+ PKMT+EKLLEYG+M+ QE+ N + VQLA +YLSEAALG++++DA ++G+FYG Sbjct: 221 KMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.664e-28 Identity = 84/215 (39.07%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 13 CLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFYGK 654 CL D+D A +GGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TREDR G CKG D + + + V SI ++A +++ + + V I LV + P+FD PKMT+EKL+EYGHM+ QE+ N + VQLA +YLSEAALG+++ DA +G+FYGK Sbjct: 211 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
BLAST of GO242251 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 9.129e-27 Identity = 83/214 (38.79%), Postives = 112/214 (52.34%), Query Frame = 1 Query: 10 SCLLF*DVDV*AVYLGGTTLMPVP-LMVAFFTFSLV*CTLLVTAP*LVQQKRQPGGATPCYRE*LPPLYAPLIEDGSEEKFYWAITREDRFGWCKGSGIND*ICENDTAKFVAACRA*SIMNIAGVKA*NNENDSMFLLSGLVVGLIVHSLVIAVFHTPSFDGPKMTMEKLLEYGHMIAQEKYNEQTVQLAAQYLSEAALGESHADASHSGSFY 648 SCL D+D A +GGTT V MV ++ V P + ++ P LYAPLI DG EKFYWA TREDR G CKG D + E + V SI ++A +++ +S V I LV + P+F+ PK+T+EKLLEYGHM+ E+ N + VQLA +YL+EAALGE++ DA +GSF+ Sbjct: 219 SCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432 The following BLAST results are available for this feature:
BLAST of GO242251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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