GO242181

Overview
NameGO242181
Unique NameGO242181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242181 vs. ExPASy Swiss-Prot
Match: APC10_ARATH (Anaphase-promoting complex subunit 10 OS=Arabidopsis thaliana GN=At2g18290 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 4.140e-40
Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 1
Query:    1 GDGFHNLKEMKTVELVKPTGWVYISLSGNDPRDPFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 267
            GDGFHNLKE+K+VELVKPTGWV +SLSG DPR+ FVNTFMLQI +LSNHLNGRDTH+RQIK+YGPRPNPIPHQ FQFTS EF TYST+R
Sbjct:  104 GDGFHNLKEIKSVELVKPTGWVCLSLSGTDPRETFVNTFMLQIAILSNHLNGRDTHIRQIKVYGPRPNPIPHQPFQFTSMEFLTYSTLR 192          
BLAST of GO242181 vs. ExPASy Swiss-Prot
Match: APC10_MOUSE (Anaphase-promoting complex subunit 10 OS=Mus musculus GN=Anapc10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.169e-16
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1
Query:    1 GDGFHNLKEMKTVELVKPTGWVYISLSGNDPRDPFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 267
            G+ FHNL+E++ +ELV+P+GW+++ L+ N  +     TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   99 GNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKP--TRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO242181 vs. ExPASy Swiss-Prot
Match: APC10_HUMAN (Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.169e-16
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1
Query:    1 GDGFHNLKEMKTVELVKPTGWVYISLSGNDPRDPFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 267
            G+ FHNL+E++ +ELV+P+GW+++ L+ N  +     TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   99 GNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKP--TRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO242181 vs. ExPASy Swiss-Prot
Match: APC10_BOVIN (Anaphase-promoting complex subunit 10 OS=Bos taurus GN=ANAPC10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.169e-16
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1
Query:    1 GDGFHNLKEMKTVELVKPTGWVYISLSGNDPRDPFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGPRPNPIPHQQFQFTSSEFNTYSTVR 267
            G+ FHNL+E++ +ELV+P+GW+++ L+ N  +     TFM+QI VL+NH NGRDTH+RQIKIY P       +  + T+ +F  Y ++R
Sbjct:   99 GNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKP--TRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185          
BLAST of GO242181 vs. ExPASy Swiss-Prot
Match: APC10_DROME (Anaphase-promoting complex subunit 10 OS=Drosophila melanogaster GN=CG11419 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 8.693e-14
Identity = 38/91 (41.76%), Postives = 61/91 (67.03%), Query Frame = 1
Query:    1 GDGFHNLKEMKTVELVKPTGWVYISLSGNDPRDPFVNTFMLQIVVLSNHLNGRDTHVRQIKIYGP-RPNPIPHQQF-QFTSSEFNTYSTVR 267
            G  F++L+E++ ++L +PTGWV I +   + +   + TFMLQI V+SNH NGRDTH+RQI+I+ P      P + F +F + +F  ++T+R
Sbjct:  107 GTNFNDLQELQVMDLTEPTGWVQIPIKDGNVKS--IRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFGKFGTVDFQKFATIR 195          
The following BLAST results are available for this feature:
BLAST of GO242181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
APC10_ARATH4.140e-4083.15Anaphase-promoting complex subunit 10 OS=Arabidops... [more]
APC10_MOUSE4.169e-1644.94Anaphase-promoting complex subunit 10 OS=Mus muscu... [more]
APC10_HUMAN4.169e-1644.94Anaphase-promoting complex subunit 10 OS=Homo sapi... [more]
APC10_BOVIN4.169e-1644.94Anaphase-promoting complex subunit 10 OS=Bos tauru... [more]
APC10_DROME8.693e-1441.76Anaphase-promoting complex subunit 10 OS=Drosophil... [more]
back to top
Properties
Property NameValue
Genbank description829 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 975 5, mRNA sequence.